DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Spn88Eb

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster


Alignment Length:410 Identity:117/410 - (28%)
Similarity:195/410 - (47%) Gaps:64/410 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FADDFYQLLAKEN--------------AANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKL- 66
            |.::|.|:...|.              .:.||..||.|...||.:||..:..:|.:|:...|.| 
  Fly    27 FLNEFSQIFKGERDFSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLG 91

  Fly    67 -PDDKKEVAAKY--KDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDI 128
             ..:|::|...|  .....:...|:....||.||||:|::...:...:|.::   :.|..|....
  Fly    92 WALNKQQVLVSYTLAQRQDEFRWRQSPMELSSANRIFVDRTINVSNKFNTLL---YGATKELDFK 153

  Fly   129 VDPNKASSIVNNWVDNQTRGKIKDLVSSNDMSKMELIVL-NAIYFKGQWEYKFNPKLTKKRNFRV 192
            .||......:|:|:.::|..:|:|::||.:::...::|| ||.|.||||..:|..:.|..:.|.:
  Fly   154 NDPETGLKEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFI 218

  Fly   193 SDQKSVPVEMMSLFQSFRAAHDSELGAKIIELPYR---------------NSSLSMLIFLPD--- 239
            ::::...|.||....:|:...|..|.::||:||||               .|.:||:|.||:   
  Fly   219 NEREQEMVYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPNSNK 283

  Fly   240 ----------QVDGLSELEKKIVGFKPKLSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKS 294
                      ..|.:.:..::.:..|.:||       ||||:.|...:|..:|..||:...|.::
  Fly   284 ISLNRVISRLNADSVKKWFERALPQKIELS-------LPKFQFEQRLELTPILSLMGVNTMFTRN 341

  Fly   295 ADFKDLVENS-NVHVKKVIHKAFIEVNEEGAEAAAATALLFVRYS-MPMPSSQMVFNADHPFAYV 357
            |.|.||..:. ::.:....|.|.|:|:|.|:.|||||.||..|.| .|.|:.   ||.:|||.::
  Fly   342 ATFGDLTADPISLVIDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPDPTK---FNCNHPFVFL 403

  Fly   358 IRDR--ETIYFQGHFVKPNE 375
            |.|.  :||.|.|.:..|.:
  Fly   404 IYDEKVDTILFAGVYSDPRQ 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 116/406 (29%)
Spn88EbNP_650427.1 serpin_crustaceans_chelicerates_insects 34..421 CDD:381059 113/399 (28%)

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