DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Spn88Eb

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_650427.1 Gene:Spn88Eb / 41829 FlyBaseID:FBgn0038299 Length:426 Species:Drosophila melanogaster


Alignment Length:410 Identity:117/410 - (28%)
Similarity:195/410 - (47%) Gaps:64/410 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FADDFYQLLAKEN--------------AANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKL- 66
            |.::|.|:...|.              .:.||..||.|...||.:||..:..:|.:|:...|.| 
  Fly    27 FLNEFSQIFKGERDFSLALMKQIREIYPSGNLFFSPFSTYNALLLAYFSSSEQTERELAQALNLG 91

  Fly    67 -PDDKKEVAAKY--KDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDI 128
             ..:|::|...|  .....:...|:....||.||||:|::...:...:|.::   :.|..|....
  Fly    92 WALNKQQVLVSYTLAQRQDEFRWRQSPMELSSANRIFVDRTINVSNKFNTLL---YGATKELDFK 153

  Fly   129 VDPNKASSIVNNWVDNQTRGKIKDLVSSNDMSKMELIVL-NAIYFKGQWEYKFNPKLTKKRNFRV 192
            .||......:|:|:.::|..:|:|::||.:::...::|| ||.|.||||..:|..:.|..:.|.:
  Fly   154 NDPETGLKEINDWIADKTHNQIRDMLSSEEITPHTMLVLANAAYMKGQWLSQFKVEETALKPFFI 218

  Fly   193 SDQKSVPVEMMSLFQSFRAAHDSELGAKIIELPYR---------------NSSLSMLIFLPD--- 239
            ::::...|.||....:|:...|..|.::||:||||               .|.:||:|.||:   
  Fly   219 NEREQEMVYMMHKTGAFKMTIDEGLQSQIIKLPYRTIYKSKETHISTPESKSDISMIIILPNSNK 283

  Fly   240 ----------QVDGLSELEKKIVGFKPKLSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKS 294
                      ..|.:.:..::.:..|.:||       ||||:.|...:|..:|..||:...|.::
  Fly   284 ISLNRVISRLNADSVKKWFERALPQKIELS-------LPKFQFEQRLELTPILSLMGVNTMFTRN 341

  Fly   295 ADFKDLVENS-NVHVKKVIHKAFIEVNEEGAEAAAATALLFVRYS-MPMPSSQMVFNADHPFAYV 357
            |.|.||..:. ::.:....|.|.|:|:|.|:.|||||.||..|.| .|.|:.   ||.:|||.::
  Fly   342 ATFGDLTADPISLVIDDAQHLAKIKVDEVGSTAAAATILLVSRSSRQPDPTK---FNCNHPFVFL 403

  Fly   358 IRDR--ETIYFQGHFVKPNE 375
            |.|.  :||.|.|.:..|.:
  Fly   404 IYDEKVDTILFAGVYSDPRQ 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 116/403 (29%)
Spn88EbNP_650427.1 SERPIN 37..418 CDD:238101 113/393 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446254
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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