DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Spn77Bc

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001262103.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster


Alignment Length:395 Identity:97/395 - (24%)
Similarity:164/395 - (41%) Gaps:49/395 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 HLC--------LLLLATSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQE 59
            |:|        ||...|....:||.:..|:.:......|...:|.|....:.|.|.||...|.::
  Fly    18 HICANTVDTKSLLQKMTDARLQFALNLLQMESTHLNLENFAMTPFSTWSLMIMFYEGAEGTTLKQ 82

  Fly    60 MRNVLKLPDDKKEVAAKYKDLLS-KLEGREKVATLSLANRIYVN-KKFQLVPSYNQMVKDS---- 118
            :|:||.:..|...:...|:|:.: .....|.....||....|.: ...:||..||.:|.:.    
  Fly    83 IRDVLAIYVDYPTLRRWYEDVRAYHYLNSENTKLFSLRYAYYDDVGDLELVKGYNSVVLEGVGEG 147

  Fly   119 --FMAEAEAIDIVDPNKASSIVNNWVDNQTRGKIKDLVSSNDM-SKMELIVLNAIYFKGQWEYKF 180
              .:.|.....:.....||.|:|:.:|..:..||....|.... |.:.::.:...|||.:|:|.|
  Fly   148 NVVLREGRPRGVDFDQGASIIINDDIDKASHAKIFSSYSRRSFNSTVTVLGITVSYFKAKWKYPF 212

  Fly   181 NPKLTKKRNF-RVSDQKSVPVEMMSLFQSFRAAHDSE---LGAKIIELPYRNSSLSMLIFLPDQV 241
            :...||...| ......:..||||  .|:.:.|:.:.   |.|.::|||:....|.|::.||...
  Fly   213 DKSQTKVEQFYNAGGSPAGKVEMM--VQTGKYAYVNNVKGLQADVLELPFGEHELVMIVILPKPS 275

  Fly   242 DGLSELEKKI--VGFKPKLSKM-------DVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADF 297
            ..:|.:.|::  :|....|.::       ||.::||||.......|...:...|:.|...:.||.
  Fly   276 QRVSLVLKQLKNLGLHRLLEELEASKNESDVEVKLPKFDTRSVLSLEDTVYEAGLTDLRNEFADL 340

  Fly   298 -KDLVENSNVHVKKVIHKAF--IEVNEEGAEAAAATALLFVRYSMPMPSS---QMVFNADHPFAY 356
             :.|:...:......::..|  |.|:|||...|           :|..||   .:.|:.:.||||
  Fly   341 GRMLIPTGDRGAYLSLYHQFARIVVDEEGLPNA-----------VPQKSSGTNNIKFHINRPFAY 394

  Fly   357 VIRDR 361
            ::..|
  Fly   395 LVLQR 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 92/376 (24%)
Spn77BcNP_001262103.1 SERPIN 36..410 CDD:238101 92/377 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446300
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
54.950

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