DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Spn77Bb

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_649206.1 Gene:Spn77Bb / 40235 FlyBaseID:FBgn0036969 Length:362 Species:Drosophila melanogaster


Alignment Length:364 Identity:88/364 - (24%)
Similarity:151/364 - (41%) Gaps:73/364 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 IALSMAYMGARAKTAQEMRNVLKLPDDKKEVAAKYKDLLS-KLEGREKVATLSLANRIYVN-KKF 105
            :.:.|.|.||...|..|:|:||.:..|...:...|:|:.: .....|.....||....|.: ...
  Fly    12 VLMIMFYEGAEGYTVNELRDVLGIYVDYPTLRRWYEDVRAYHYLNSENTKLFSLRYAYYDDVGDL 76

  Fly   106 QLVPSYNQMVKDS------FMAEAEAIDIVDPNKASSIVNNWVDNQTRGKIKDLVSSNDM-SKME 163
            :||..||.:|.:.      .:.|.....:.....||.|:|:.:|..:..||....|.... |.:.
  Fly    77 ELVKGYNSVVLEGVGEGNVVLREGRPRGVDFDQGASIIINDDIDKASHAKIFSSYSRRSFNSTVT 141

  Fly   164 LIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPVEMMSLFQSFRAAHDSE---LGAKIIELP 225
            ::.:...|||.:|:|.|:...||...| .:|..|...::..:.|:.:.|:.:.   |.|.::|||
  Fly   142 VLGITVSYFKAKWKYPFDKSQTKVEQF-YNDGGSPAGKVEMMVQTGKYAYVNNVKGLQADVLELP 205

  Fly   226 YRNSSLSMLIFLPDQVDGLSEL--EKKIVGFKPKLSKM-------DVTLRLPKFKIEF------- 274
            :....|.|::.||....|::.:  :.|.:|....|.|:       ||.::||||....       
  Fly   206 FGEHELVMIVLLPKSSQGVNLVLYQLKNLGLHRLLEKLEASKNETDVEVKLPKFDTRSVLSLEDT 270

  Fly   275 ------------FAQLNKVLVAMGIQDAFEKSADFKDLVENSNVHVKKVIHK-AFIEVNEEGAEA 326
                        ||.|:|:|:|:|.:.|                 ...:.|: |.|.|:|||...
  Fly   271 VYDAGLTDLRNDFADLDKLLIAIGHRGA-----------------CLTLYHQFARIVVDEEGLPN 318

  Fly   327 AAATALLFVRYSMPMPSS---QMVFNADHPFAYVIRDRE 362
            |           :|..||   .:.|:.:.||||::..::
  Fly   319 A-----------VPQKSSGKNNIKFHVNRPFAYLVLQKK 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 88/364 (24%)
Spn77BbNP_649206.1 SERPIN 13..356 CDD:238101 88/363 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446292
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
54.950

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