DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpinb1c

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:XP_006516771.1 Gene:Serpinb1c / 380839 MGIID:2445363 Length:408 Species:Mus musculus


Alignment Length:384 Identity:128/384 - (33%)
Similarity:205/384 - (53%) Gaps:34/384 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKLPDDKKEVAA 75
            :|.:..||.:.:..|.:.|...|.|.||:|:..||:|.|:|||..||.::...|.. |..:::.:
Mouse    38 SSANNLFALELFHTLNESNPTGNTIFSPVSISSALAMVYLGARGSTAAQLSKTLHF-DSAEDIHS 101

  Fly    76 KYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNK-ASSIVN 139
            :::.|.:::..|....||.||||:|..|.:..:|.|...::.::.|:...:|....:: |...:|
Mouse   102 QFQSLTAEVSKRGASHTLKLANRLYGEKTYNFLPEYLASIQKTYSADLALVDFQHASEDARKEIN 166

  Fly   140 NWVDNQTRGKIKDLVSSNDMSKM-ELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPVEMM 203
            .||..||..||::|.:...:..| :|:::||.||||.|:.||..:.|....||:|.:.:..|:||
Mouse   167 QWVKGQTEEKIQELFAVGVVDSMTKLVLVNATYFKGMWQKKFMARDTTDAPFRLSKKVTKTVKMM 231

  Fly   204 SLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLP----DQVDGLSELEKKIVGFK----PKLSK 260
            .|..:....:..:|..|::|:||:...|||:|.||    |:..||.|:||::...|    ..|..
Mouse   232 YLKNNLPFGYIPDLKCKVLEMPYQGGELSMVILLPEDIEDETTGLEEIEKQLTLEKLQECENLQN 296

  Fly   261 MDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKS-ADFKDLVENSNVHVKKVIHKAFIEVNEEGA 324
            :||.::|||||:|....||..|..:|:||.|..| ||...:..:.::.:.|::||:::||||||.
Mouse   297 IDVCVKLPKFKMEESYILNSNLGQLGVQDLFSSSKADLSGMSGSRDLFISKIVHKSYVEVNEEGT 361

  Fly   325 EAAAATALLFVRYSMP--------MPSSQMVFNADHPFAYVIRDRET--IYFQGHFVKP 373
            |..||         ||        ||   |.|..||||.:.||...|  :.|.|....|
Mouse   362 ETDAA---------MPGTVVGCCLMP---MEFTVDHPFLFFIRHNPTAHVLFLGRVCSP 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 126/376 (34%)
Serpinb1cXP_006516771.1 serpinB1_LEI 34..408 CDD:381028 127/382 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.930

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