DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpina11

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001008776.1 Gene:Serpina11 / 362774 RGDID:1359239 Length:462 Species:Rattus norvegicus


Alignment Length:420 Identity:101/420 - (24%)
Similarity:192/420 - (45%) Gaps:68/420 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKT-AQEMR----NVLKLPDDK 70
            |.....||...|:.||:| ...|::.||:|:...:::..:||.|.| ||.::    |:.:.|  .
  Rat    51 TPTITNFALRLYKQLAEE-IPGNILFSPVSLSSTVALLSLGAHADTQAQILQSLGFNLTETP--A 112

  Fly    71 KEVAAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNKAS 135
            .::...::.||..|:.......|.|.:.::::::.:....:....|:.:.|.|.:.:..:.....
  Rat   113 ADIHRGFQSLLHTLDLPSPKLELKLGHSLFLDRQLKPQQRFLDSAKELYGALAFSANFTEAAATG 177

  Fly   136 SIVNNWVDNQTRGKIKDLVSSNDMSKMELIVLNAIYFKGQWEYKFNPKLTKKR-NFRVSDQKSVP 199
            ..:|:.|..||.|::...:...|...: :::||.|:||.:|::.|:...|:|: :|.|..:..:.
  Rat   178 QQINDLVRKQTYGQVVGCLPEFDRDTL-MVLLNYIFFKAKWKHPFDRYQTRKQESFFVDQRLQLR 241

  Fly   200 VEMMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLI-------------------------FLPD 239
            :.||...:..|..:|.|....::::.|..::|.:|:                         |||.
  Rat   242 IPMMRQKEMHRFLYDQEASCTVLQIEYSGTALLLLVLPDPGKMQQVEAALQPETLRRWGQRFLPR 306

  Fly   240 QV------------DGLSELEKKIVGFKPKLSKMDVT-------LRLPKFKIEFFAQLNKVLVAM 285
            :.            |.::|..:..|| |..|..:.:|       |.||:|.:.....|.::|..:
  Rat   307 KAQAGGAGNGGLHWDRVNEFPQNRVG-KLSLKHLQMTQTWSLLDLHLPRFSVSATYNLEEILPLV 370

  Fly   286 GIQDAFEKSADFKDLVENSNVHVKKVIHKAFIEVNEEGAEAAAATALLFVRYSMPMPSSQMVFNA 350
            |:...|:..||...::...|..|.:|.|||.:::||:|.|||||:.||    |.| ||..|. :|
  Rat   371 GLSSLFDVEADLSGIMGQLNKTVSRVSHKAVVDMNEKGTEAAAASGLL----SQP-PSLNMT-SA 429

  Fly   351 DH-----PFAYVIRD--RETIYFQGHFVKP 373
            .|     ||..::.:  .:::.|.|..|.|
  Rat   430 PHAHFNRPFLLLLWEVTTQSLLFLGKVVNP 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 98/412 (24%)
Serpina11NP_001008776.1 alpha-1-antitrypsin_like 53..456 CDD:239011 98/413 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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