DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Spn43Ad

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_610261.1 Gene:Spn43Ad / 35639 FlyBaseID:FBgn0044011 Length:407 Species:Drosophila melanogaster


Alignment Length:365 Identity:88/365 - (24%)
Similarity:171/365 - (46%) Gaps:40/365 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 NLISSPLSVEIALSMAYMGARAKTAQEMRNVLKL--PDDKKEVAAKYKDLLSKLEGREKV-ATLS 94
            |::.|||.::.|||:.|..:.::...::|..|:|  ....|.....::.||:.|:....: ..|.
  Fly    55 NVVVSPLLIQAALSLLYAESSSEYGSQLRQALELTHASHPKLAVQDFETLLTDLKQSAAIGCRLR 119

  Fly    95 LANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDI-------VDPNKASSIVNNWVDNQTRGKIKD 152
            |.:.:|..::|    ::|  .::.|...|..:.:       ...:.|:..:|....:::...:.:
  Fly   120 LLSDLYAQQRF----TFN--FRNEFETLAARMGVGCHRLSWESASNAAQDINYAFLSRSNFSLGE 178

  Fly   153 LVSSNDMSKM-----ELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPVEMMSLFQSFRAA 212
            |||:..:..:     ..:.::.:.|:..|.:.|:|..|:..||.....:...|:.|.....:|.|
  Fly   179 LVSAPQLESLAEHNTPFLHVSGVTFRAPWAWAFDPTETQSINFFAGGNRPRLVDAMFGQHRYRYA 243

  Fly   213 HDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKKIV-----GFKPKLSKMDVTLRLPKFKI 272
            ....|.|::||:|:..:.|.|||..|::.|||::||:|:.     ..:.:|.:..|.|.|||.::
  Fly   244 EVPALDAQLIEVPFATADLRMLIVFPNRPDGLAQLERKLAQSDLHQLRSQLEERKVALTLPKLRV 308

  Fly   273 EFFAQLNKVLVAMGIQDAFEK----SADFKDLVENSNVHVKKVIHKAFIEVNEEGAEAAAATAL- 332
            ...:.|..||..:|:...|..    |..|..::.:|...:..|:....:|:.|:|..|..:.:. 
  Fly   309 LVHSDLKHVLEELGLAKLFTSEVHLSEVFSSILSSSAPPLGAVVQSGLLELQEDGGNADDSFSFG 373

  Fly   333 -LFVRYSMPMPSSQMVFNADHPFAYVIRDRETIYFQGHFV 371
             || |.::|     :|.|  |||.|.|.:.:|:...||.|
  Fly   374 DLF-RRALP-----LVIN--HPFFYAIGNGKTLLLSGHIV 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 86/362 (24%)
Spn43AdNP_610261.1 SERPIN 35..404 CDD:238101 86/362 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446352
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

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