DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28F and Spn42Dc

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001246154.1 Gene:Spn42Dc / 35600 FlyBaseID:FBgn0033113 Length:403 Species:Drosophila melanogaster


Alignment Length:373 Identity:122/373 - (32%)
Similarity:205/373 - (54%) Gaps:17/373 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RFADDFYQLLAKENAAN------NLISSPLSVEIALSMAYMGARAKTAQEMRNVLKL-PDDKKEV 73
            :||.:...::.|:....      |.:.||.||:.||::|:|||...||:|:||.|:| |.|:..:
  Fly    10 QFARNLIDVITKDALQQSKDPHINTVFSPASVQSALTLAFMGASGSTAEELRNGLQLGPGDRHHI 74

  Fly    74 AAKYKDL-LSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNKASSI 137
            |..:.:. .:.....::...|...||:|||...:|:..:|::..|.|.::|||....|...|:.:
  Fly    75 ALNFGEFWRTSCNYGDRGPVLKSVNRLYVNDSLELLTEFNEIAVDFFQSKAEATRFADSEGATQL 139

  Fly   138 VNNWVDNQTRGKIKDLVSSNDM-SKMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPVE 201
            :|:||:.:|..||.:|:.|:.: ::...:::|.:||||:|:..|.|:.|...:|.|.....|.|.
  Fly   140 INDWVEQETEHKITNLLQSDAVNNETSALLINVLYFKGKWQKPFMPETTSIDHFHVDRDTHVQVN 204

  Fly   202 MMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKK-----IVGFKPKLSKM 261
            ||.....||.|...:|.|:.::|||..|::.|||.||::|:||.|||::     :......|:..
  Fly   205 MMYQEDKFRFAELPQLKARAVQLPYDYSNIHMLILLPNEVNGLQELEQQLNTVDLADIDAALTLQ 269

  Fly   262 DVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDL-VENSNVHVKKVIHKAFIEVNEEGAE 325
            ||.:.||:..||:...|.:||..:||.:.|...|....| ...|...:....|:.:|:|||.|:|
  Fly   270 DVEIFLPRMCIEYDVDLKQVLNQLGITEVFSDKAKLDGLFTSQSGQKISAARHRGYIDVNEAGSE 334

  Fly   326 AAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRETIYFQGHFVKP 373
            |||.:.:..|  .|.:..::.:|.|||||.:.||:.:.::|.|.|..|
  Fly   335 AAAVSFMKIV--PMMLNMNKKLFKADHPFVFYIRNPQAVFFAGRFSNP 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 120/368 (33%)
Spn42DcNP_001246154.1 SERPIN 7..377 CDD:238101 120/368 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446357
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
99.000

Return to query results.
Submit another query.