DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Spn28Da

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001036345.1 Gene:Spn28Da / 34082 FlyBaseID:FBgn0051902 Length:384 Species:Drosophila melanogaster


Alignment Length:376 Identity:159/376 - (42%)
Similarity:233/376 - (61%) Gaps:7/376 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKHLCLLLLATSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLK 65
            ||:||.:|:.|||..:|....|:...::|...|:|:|||.|||.:||..|||...||.|:|..|.
  Fly     1 MKYLCWILVTTSVLGQFTKQLYRSFLQDNKQYNIIASPLCVEIGMSMILMGADGNTANELRTALN 65

  Fly    66 LPDDKKEVAAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVD 130
            ||:|||.||..|..||:|||..:|||.|.||||::||:...:...||::|...|.||||||.:.|
  Fly    66 LPEDKKNVATIYDKLLTKLERGKKVAILHLANRLFVNETIGVNKRYNKLVNKHFRAEAEAIKLAD 130

  Fly   131 PNKASSIVNNWVDNQTRGKIKDLVSSNDMSKME-LIVLNAIYFKGQWEYKFNPKLTKKRNFRVSD 194
            ..||:..:|:||.:||...:||::..:|::..| .:::||.:|||.|:.:|:...||.:.|.||.
  Fly   131 RLKAAWAINDWVLDQTLDNVKDIIIPSDLTPDESAVMINAAFFKGYWKTRFDKMNTKPKVFYVSK 195

  Fly   195 QKSVPVEMMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKKIVGFKPK-- 257
            ...|.|.|||....|: ...|.:. :|||||:..|:|||:|.||.....|::.|..|..: |:  
  Fly   196 SYQVNVNMMSQVGRFK-MRTSTID-QIIELPFAYSNLSMVIVLPKDNGSLTQAEATIESY-PQIV 257

  Fly   258 LSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENSNVHVKKVIHKAFIEVNEE 322
            |::|||.::||||||:|..:|.:.|.:|||||.|..|:|...|:..|...:.:|:||||||::||
  Fly   258 LTEMDVHVQLPKFKIDFRMELVETLKSMGIQDLFNSSSDISVLLNQSGTRISQVVHKAFIEIDEE 322

  Fly   323 GAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRETIYFQGHFVKP 373
            |..|.:|:|.. :|......:|.:.|..:.||.::|||.:.|||:|..|.|
  Fly   323 GGSAGSASASP-IRGLSDYATSVVTFTVNSPFVFMIRDDDNIYFRGRVVDP 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 152/363 (42%)
Spn28DaNP_001036345.1 serpin42Dd-like_insects 12..372 CDD:381070 152/363 (42%)

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