DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28F and Spn28B

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster


Alignment Length:378 Identity:183/378 - (48%)
Similarity:250/378 - (66%) Gaps:7/378 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKHLCLLLLATSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLK 65
            ||:|.||||||||...|.:|||::||.:||..|||.||:|.||.:||.||.:..||.:|:|||||
  Fly     1 MKYLYLLLLATSVESGFWEDFYRILASQNAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLK 65

  Fly    66 LPDDKKEVAAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVD 130
            ..::|..||..|:.|||.|:.||....|.:|||||||||:.|||.:||:.:.:|.|:|::|.:.|
  Fly    66 FSENKTLVANNYRSLLSDLKRRETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDD 130

  Fly   131 PNKASSIVNNWVDNQTRGKIKDLVSSNDM-SKMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSD 194
            |..||:|||:|:.|:|||.|:::|...|. |.....::|||||||||.|.|....|...:|.||.
  Fly   131 PVSASAIVNSWILNRTRGMIRNIVLPKDFNSDTSAFLVNAIYFKGQWLYNFKADQTHIADFYVSA 195

  Fly   195 QKSVPVEMMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKKIVGFKPKLS 259
            .:.:||:||:|..|..:.:..::.||||||||.||:|||.|.||:.||||.:|::|:......|.
  Fly   196 NEIIPVKMMTLSASLLSGYIDDIDAKIIELPYWNSTLSMRIILPNSVDGLRKLKEKVGFIDYHLE 260

  Fly   260 KMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENSNVHVKKVIHKAFIEVNEEGA 324
            |..|.::|||||||..|||..:...:||.|.|:.|||...||..|...:.|::.|||::::|:|.
  Fly   261 KKSVNVKLPKFKIESKAQLKGIFENLGILDVFKPSADLNGLVLESGAKIDKIVQKAFLKIDEKGG 325

  Fly   325 EAAAATALLFVRY----SMPMPSSQMVFNADHPFAYVIRDRETIYFQGHFVKP 373
            ||:|||.:|..|.    ::..|  .|.|.|||||.|||.|.:.||||||.|:|
  Fly   326 EASAATGVLTRRKKSIDNLIQP--PMEFIADHPFFYVIHDNKVIYFQGHIVEP 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 173/365 (47%)
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 173/365 (47%)

Return to query results.
Submit another query.