DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28F and serpinb1l3

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:XP_005174262.1 Gene:serpinb1l3 / 335119 ZFINID:ZDB-GENE-030131-7059 Length:415 Species:Danio rerio


Alignment Length:379 Identity:120/379 - (31%)
Similarity:205/379 - (54%) Gaps:19/379 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKLPDDKKEVAA 75
            ::...||....:|.::..:::.|:..||||:..||||..:||...|..:|...|.....:.::.|
Zfish    40 SAAHARFCLSLFQKISDGDSSQNVFFSPLSISAALSMLSLGAAGNTKDQMSQTLHFDGAESQIHA 104

  Fly    76 KYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIV-DPNKASSIVN 139
            .:..||:::.......|||||:|:|..:..:...::....:..:.||.:.:|.: .|..:..|:|
Zfish   105 GFTKLLTEMNRAGAPHTLSLASRLYGEQSCRFQETFLSDTRRLYGAELQPLDFISQPEASRGIIN 169

  Fly   140 NWVDNQTRGKIKDLVSSNDMSKM-ELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPVEMM 203
            .||:.||..||:||::...:..: .|:::||:|||..||.||..:.|.::.||.|..:|.||:||
Zfish   170 RWVEQQTHEKIRDLLAEGSVDSLSRLVLVNAVYFKSSWERKFLEEHTHEQQFRTSRNESKPVQMM 234

  Fly   204 SLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVD----GLSELEKKIV-------GFKPK 257
            .....|..|...::..:|:||||....||||:.||:.::    ||.:||:.:.       .....
Zfish   235 FQKGRFPLAFIPDVNCQILELPYAGKELSMLVLLPNAMEDDGTGLEKLERALTLETLTDWTRSDM 299

  Fly   258 LSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFE-KSADFKDLVENSNVHVKKVIHKAFIEVNE 321
            :..::|.:.||:.::|...:|..:||.:|:.|||: :.|||..:.....:.:..|:|::|:||||
Zfish   300 MDVLEVEVSLPRLRVEERLELKPLLVELGMPDAFDPQRADFSGVCAGGELLLSTVVHQSFLEVNE 364

  Fly   322 EGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRET--IYFQGHFVKP 373
            ||.|||||||.:.:...: |.:.:  |.|||||..:||...|  :.|.|....|
Zfish   365 EGTEAAAATAAVMMTRCL-MRAER--FCADHPFLMLIRHNPTGSLLFYGRVCNP 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 119/371 (32%)
serpinb1l3XP_005174262.1 SERPIN 39..415 CDD:294093 119/377 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 229 1.000 Inparanoid score I3432
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.880

Return to query results.
Submit another query.