DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpinb1b

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:XP_038952280.1 Gene:Serpinb1b / 306891 RGDID:1560658 Length:380 Species:Rattus norvegicus


Alignment Length:384 Identity:126/384 - (32%)
Similarity:211/384 - (54%) Gaps:29/384 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKLP-----DDK 70
            :|.:..||.:.:..|::.:...| |.||.|:..||:|.::||:..:|.   :.|:|.     |..
  Rat     5 SSANSLFALELFHTLSESSPTGN-IFSPFSISSALAMVFLGAKGSSAP---SSLRLAETFHFDSV 65

  Fly    71 KEVAAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNK-A 134
            :::.::::.|.:::.......||.:|||:|..|.:..:|.:....:..:.|:...:|....:: |
  Rat    66 EDIHSRFQSLNAEMRKHGASHTLKVANRLYGEKTYNFLPEFLASTQKMYGADLAPVDFQHASEDA 130

  Fly   135 SSIVNNWVDNQTRGKIKDLVSSNDM-SKMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSV 198
            ...:|.||..||.|||.:|::...: |..:|:::|||||||.|:.||..:.|....||::.:.:.
  Rat   131 RKEINKWVKGQTEGKIPELLAGGVVNSTTKLVLVNAIYFKGIWQEKFLTRHTTDAPFRLNKKDTK 195

  Fly   199 PVEMMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVD----GLSELEKKIVGFK---- 255
            .|:||...:.|...:..:|..|::|:||:...|||:|.||:.::    ||.::|:::...|    
  Rat   196 MVKMMYQKEKFPFGYIPDLKCKVLEMPYQGGELSMVILLPEDIEDESTGLQKIEEQLTLEKLYEW 260

  Fly   256 ---PKLSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKS-ADFKDLVENSNVHVKKVIHKAF 316
               ..|.::||.:.|||||||....||..|..:|:||.|..| ||...:.|:.::.:.|::||:|
  Rat   261 TKHENLKEIDVHVNLPKFKIEESYILNSNLGRLGLQDLFSSSKADLSGMSESRDIFISKIVHKSF 325

  Fly   317 IEVNEEGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRET--IYFQGHFVKP 373
            :||||||.|||||||.| |.|.:   .|...|..||||.:.||...|  :.|.|....|
  Rat   326 VEVNEEGTEAAAATAGL-VEYCL---VSIEAFIVDHPFLFFIRHNPTANMLFFGRVCSP 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 125/381 (33%)
Serpinb1bXP_038952280.1 serpinB1_LEI 1..380 CDD:381028 125/382 (33%)

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