DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpinc1

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001012027.1 Gene:Serpinc1 / 304917 RGDID:1307404 Length:465 Species:Rattus norvegicus


Alignment Length:386 Identity:120/386 - (31%)
Similarity:210/386 - (54%) Gaps:31/386 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVSCRFADDFYQLLA-KENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKLPDDKKEVA 74
            :..:.|||.:|||.|| .:|..:|:..||||:..|.:|..:||...|.:::..|.|.....::.:
  Rat    85 SKANSRFATNFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNNTLKQLMEVFKFDTISEKTS 149

  Fly    75 AKYKDLLSKLEGR-----EKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVD-PNK 133
            .:.....:||..|     .|.:.|..|||::.:|......||..:.:..:.|:.:.:|..: |.:
  Rat   150 DQIHFFFAKLNCRLYRKANKSSNLVSANRLFGDKSLTFNESYQDVSEIVYGAKLQPLDFKENPEQ 214

  Fly   134 ASSIVNNWVDNQTRGKIKDLVSSNDMSKM-ELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKS 197
            :...:||||.|:|.|:|||::....:.:: .|:::|.|||||.|:.||:|:.|:|..|...|.:|
  Rat   215 SRVTINNWVANKTEGRIKDVIPQGAIDELTALVLVNTIYFKGLWKSKFSPENTRKEPFHKVDGQS 279

  Fly   198 VPVEMMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKKIV-----GFKPK 257
            ..|.||.....|:.....| |.:::|:|::...::|::.||.....|:::|:::.     .:..:
  Rat   280 CLVPMMYQEGKFKYRRVGE-GTQVLEMPFKGDDITMVLILPKPEKSLAKVEQELTPELLQEWLDE 343

  Fly   258 LSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAF--EKS------ADFKDLVENSNVHVKKVIHK 314
            ||::.:.:.:|:|:||....|.:.|..||:.|.|  |||      |:.:|     ::.|....||
  Rat   344 LSEVMLVVHVPRFRIEDSFSLKEQLQDMGLVDLFSPEKSQLPGIIAEGRD-----DLFVSDAFHK 403

  Fly   315 AFIEVNEEGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRD--RETIYFQGHFVKP 373
            ||:||||||:||||:|:::....|  :..|::.|.|:.||..:||:  ..||.|.|....|
  Rat   404 AFLEVNEEGSEAAASTSVVITGRS--LNPSRVTFKANRPFLVLIREVALNTIIFMGRVSNP 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 119/383 (31%)
Serpinc1NP_001012027.1 serpinC1_AT3 71..464 CDD:381002 120/386 (31%)

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