DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpinb12

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001129339.1 Gene:Serpinb12 / 304692 RGDID:1566382 Length:421 Species:Rattus norvegicus


Alignment Length:415 Identity:134/415 - (32%)
Similarity:217/415 - (52%) Gaps:60/415 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVL---KLPDDKK----EV 73
            :|..||:|.::|::|..|:...|||:..|..|..:|||..:||::..||   :||.|::    |.
  Rat    10 KFCFDFFQEISKDDAHKNIFVCPLSLSAAFGMVRLGARGDSAQQIDEVLHFNELPKDERKEPSEP 74

  Fly    74 AAKYKDLLSKLEGREKVA----------------------------------TLSLANRIYVNKK 104
            ::|.|...|.|||:::..                                  |||:|||:|..::
  Rat    75 SSKSKASDSSLEGQKQTTASQGQQGESTNEHRLLGCHFGKLLSRIDRDKAHYTLSMANRLYGEQE 139

  Fly   105 FQLVPSYNQMVKDSFMAEAEAIDI-VDPNKASSIVNNWVDNQTRGKIKDLVSSNDMSKMELIVL- 167
            |.:.|.|:..:.:.:....|::|. .|..|:...:|.||::|::||||:|.....:....::|| 
  Rat   140 FPICPEYSDDITEFYHTTIESVDFQKDTEKSREEINFWVESQSQGKIKELFDKEAIDNSTVLVLV 204

  Fly   168 NAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPVEMMSLFQSFRAAHDSELGAKIIELPYRNSSLS 232
            ||:|||.:||.:|:.:.|....|.:|:.:...|:||:....||.....||.|:|:|:.|....||
  Rat   205 NAVYFKAKWEKEFDSENTVDAPFCLSENEKKTVKMMNQKGQFRIGFIEELQAQILEMKYTTGKLS 269

  Fly   233 MLIFLP----DQVDGLSELEKKIVGFK-------PKLSKMDVTLRLPKFKIEFFAQLNKVLVAMG 286
            ||:.||    |.|..|.||||||...|       ..:|:..|.:..|:|.:|....||.||..||
  Rat   270 MLVLLPSSSEDNVKSLQELEKKINHEKLLAWSNPENMSEKPVAISFPQFIMEDSYDLNSVLQDMG 334

  Fly   287 IQDAFE-KSADFKDLVENSNVHVKKVIHKAFIEVNEEGAEAAAATALLFVRYSMPMPSSQMVFNA 350
            |:|.|: ..||...:.::.::|:.||:||.|:||:|.|.:||||:..:....::|   |::.|||
  Rat   335 IRDVFDGTKADLTGISKSPSLHLSKVVHKTFVEVDEMGTQAAAASGAVVAEKALP---SRVEFNA 396

  Fly   351 DHPFAYVIRDR--ETIYFQGHFVKP 373
            :.||.:.||..  :::.|.|....|
  Rat   397 NRPFLFFIRHNGTQSLLFCGRVYSP 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 133/413 (32%)
Serpinb12NP_001129339.1 serpinB12_yukopin 1..421 CDD:381037 133/413 (32%)

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