DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpinb13

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001100638.1 Gene:Serpinb13 / 304690 RGDID:1304661 Length:389 Species:Rattus norvegicus


Alignment Length:389 Identity:119/389 - (30%)
Similarity:209/389 - (53%) Gaps:30/389 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVL---------KL 66
            ::.:..|..|.::.|.| .:..|:..|||.:..|:.|..:|.:..||.|::.||         :|
  Rat     5 STATTHFLFDLFKELNK-TSDGNVFFSPLGISTAIGMILLGTQGATASELQKVLYSEQGTGSSRL 68

  Fly    67 PDDKKEVAA------KYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEA 125
            ..::||:..      :::.||:::....|...|.::||:|..:.:..:..|...|:..:.|..|.
  Rat    69 KSEEKEIEKTEEIHHQFQKLLTEISKPTKDYDLIISNRLYGERTYLFLQKYIDYVEKYYHASLEP 133

  Fly   126 IDIVD-PNKASSIVNNWVDNQTRGKIKDLVSSNDM-SKMELIVLNAIYFKGQWEYKFNPKLTKKR 188
            :|.|: .:::...:|:||::||..|:|||.....: |..:|:::|.:||||.|:.:|..:.||:.
  Rat   134 VDFVNAADESRKKINSWVESQTNEKVKDLFPEGSLNSSTKLVLINTVYFKGLWDREFKKEHTKEE 198

  Fly   189 NFRVSDQKSVPVEMMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSEL------ 247
            :|.::...|.||:||:...||......:|.|||:.:||:||..||.:.||:.:|||.::      
  Rat   199 DFWLNKNISKPVQMMAQCSSFSFTLLEDLQAKIVGIPYKNSDFSMFVLLPNDIDGLEKIIDKLSP 263

  Fly   248 EKKIVGFKP-KLSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENSNVHVKKV 311
            ||.:....| :|.:..|.||||:.|:|....|...|.|:||..||.:.||:..:..:|.:..:..
  Rat   264 EKLVEWTSPGQLKQRKVDLRLPRLKVEETYDLQPTLEAVGIHSAFSEHADYSGMSAHSGLQTQNF 328

  Fly   312 IHKAFIEVNEEGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRE--TIYFQGHFVKP 373
            :|::|:.|.|||.||.|.|.   |.:.:...:|..:.:.:|||.:.:|.||  :|.|.|.|..|
  Rat   329 LHRSFLVVTEEGVEATAGTG---VGFKVLSAASCELVHCNHPFLFFVRHRESDSILFFGRFSSP 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 117/381 (31%)
Serpinb13NP_001100638.1 SERPIN 4..389 CDD:294093 118/387 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

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