DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpinb3

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001382662.1 Gene:Serpinb3 / 304688 RGDID:1549766 Length:387 Species:Rattus norvegicus


Alignment Length:390 Identity:126/390 - (32%)
Similarity:206/390 - (52%) Gaps:30/390 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LATSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKLPD----- 68
            |....:.:|..:.|:.|  .::.:|:..||||:..||:|..:||:..|.:::...|:|.:     
  Rat     3 LFAKATTQFTLELYRQL--RDSEDNIFYSPLSIMTALAMLQLGAKGNTEKQIEKALQLSETTKKP 65

  Fly    69 --------DKKEVAAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEA 125
                    |::.|..:::.::::|........|...|.||..|.|..:.::.:.:|..:.|..|:
  Rat    66 KEKSADSHDEENVHEQFRKIMNQLNKSNGAYDLKSPNSIYGAKGFPFLQTFMEDIKKYYQANVES 130

  Fly   126 IDIVD-PNKASSIVNNWVDNQTRGKIKDLVSSNDMSKMELIVL-NAIYFKGQWEYKFNPKLTKKR 188
            :|... ..::...:|:||:|:|.||||||.....::...::|| ||:||||||.:||:.:.|::.
  Rat   131 LDFAHAAEESQKKINSWVENKTNGKIKDLFPRGSLNSSTILVLVNAVYFKGQWNHKFDEQRTRED 195

  Fly   189 NFRVSDQKSVPVEMMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKK--- 250
            .|.::...|.||:||.....|......::.||::|:||:...|||.|.||.::|||.:||:|   
  Rat   196 KFWLNKNTSKPVQMMRQTNEFNFIFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKKLEEKLSA 260

  Fly   251 ---IVGFKPKLSKM-DVTLRLPKFKIEFFAQLNKVLVAMGIQDAFE-KSADFKDLVENSNVHVKK 310
               :....||..:| .:.|.||:||::....|...|..||:.|||. :.|||..:.....:.|.|
  Rat   261 DTLLAWTSPKNMRMTQLNLSLPRFKVQEKYDLPGPLEHMGMVDAFNPQKADFSGMSSTKGLVVSK 325

  Fly   311 VIHKAFIEVNEEGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRET--IYFQGHFVKP 373
            |:||:|:|||||||||||||.:.....|.|..:.   |..:.||...|:...|  |.|.|....|
  Rat   326 VLHKSFLEVNEEGAEAAAATGVETRILSAPRTTE---FTCNRPFIVFIKPNNTNSILFFGRVSSP 387

  Fly   374  373
              Rat   388  387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 124/380 (33%)
Serpinb3NP_001382662.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.830

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