DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpina3m

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001257911.1 Gene:Serpina3m / 299276 RGDID:735068 Length:419 Species:Rattus norvegicus


Alignment Length:383 Identity:114/383 - (29%)
Similarity:194/383 - (50%) Gaps:28/383 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLATSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKL---PDD 69
            |...|::..||...|::||.:|...|::.||||:..||::..:||:..|.:|:..||:.   ...
  Rat    45 LTLESINTDFAFSLYKMLALKNPDKNVVFSPLSISAALAIVSLGAKGNTLEEILEVLRFNLTESY 109

  Fly    70 KKEVAAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNKA 134
            :.::...:..||.:|........:...|.::::|..|::..:.:..:..:..||...|...|...
  Rat   110 ETDIHQGFGHLLQRLSQPGDQVKIITGNALFIDKNLQVLAEFQEKTRALYQVEAFTADFQQPRVT 174

  Fly   135 SSIVNNWVDNQTRGKIKDLVSSNDMSKMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVP 199
            ..::|::|.|||:|||::|||.. ..:..::::|.:.|:|:|:..|:|..|.:..|.|.:::||.
  Rat   175 EKLINDYVRNQTQGKIQELVSGL-KERTSMVLVNYLLFRGKWKVPFDPDYTFESEFYVDEKRSVK 238

  Fly   200 VEMMSLFQ----SFRAAHDSELGAKIIELPYRNSSLSMLIFLPD-----QVDGLSE---LEKKIV 252
            |.||.:.:    .||   |.||...::||.|..:| |.|..|||     ||:...:   |:|...
  Rat   239 VSMMKIEELTTPYFR---DEELSCSVLELKYTGNS-SALFILPDKGRMQQVEASLQPETLKKWKD 299

  Fly   253 GFKPKLSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENSNVHVKKVIHKAFI 317
            ..:|:  |:| .|.||:..|.....|.:||..:||:|.|.:.||...:....::.|.:|:||..:
  Rat   300 SLRPR--KID-ELYLPRLSISTDYSLEEVLPELGIRDVFSQQADLSRITGAKDLSVSQVVHKVVL 361

  Fly   318 EVNEEGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDR--ETIYFQGHFVKP 373
            :|||.|.||||||....|..|...|   |:...:.||...:...  :||.|....:.|
  Rat   362 DVNETGTEAAAATGANLVPRSGRPP---MIVWFNRPFLIAVSHTHGQTILFMAKVINP 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 112/377 (30%)
Serpina3mNP_001257911.1 serpinA3_A1AC 37..416 CDD:381019 113/381 (30%)

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