DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpinb1a

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001026812.1 Gene:Serpinb1a / 291091 RGDID:1306203 Length:379 Species:Rattus norvegicus


Alignment Length:379 Identity:127/379 - (33%)
Similarity:211/379 - (55%) Gaps:20/379 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKLPDDKKEVAA 75
            :|.:..||.:.:..|::.:...|:..||.|:..||:|.::|.:..||.::...... |..::|.:
  Rat     5 SSANSLFALELFHTLSESSPTGNIFFSPFSISSALAMVFLGTKGTTAAQLSKTFHF-DSVEDVHS 68

  Fly    76 KYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNK-ASSIVN 139
            :::.|.:::..|....||.||||:|..|.:..:|.:....:..:.|:...:|....:: |...:|
  Rat    69 RFQSLNAEVSKRGASHTLKLANRLYGEKTYNFLPEFLTSTQKMYGADLAPVDFQHASEDARKEIN 133

  Fly   140 NWVDNQTRGKIKDLVSSNDMSKM-ELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPVEMM 203
            .||..||.|||.:|::...:..| :|:::|||||||.||.||..:.|....||::.:.:..|:||
  Rat   134 QWVKGQTEGKIPELLAVGVVDSMTKLVLVNAIYFKGMWEEKFMKQDTTDAPFRLNKKNTKSVKMM 198

  Fly   204 SLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVD----GLSELEKKIVGFK-------PK 257
            ...:.|...:.|:|..|::|:||:...|||:|.||:.::    ||.::|::|...|       ..
  Rat   199 YQKKKFFFGYISDLKCKVLEMPYQGGELSMVILLPEDIEDESTGLKKIEEQITLEKLREWTKREN 263

  Fly   258 LSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKS-ADFKDLVENSNVHVKKVIHKAFIEVNE 321
            |..:||.::||:||||....||..|..:|:||.|..| ||...:..:.::.:.|::||||:||||
  Rat   264 LENIDVHVKLPRFKIEESYILNSNLGRLGLQDLFNSSKADLSGMSGSRDLFISKIVHKAFVEVNE 328

  Fly   322 EGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRET--IYFQGHFVKP 373
            ||.|||||||.: ..:.|.:|..:  |.|||||.:.||...|  :.|.|....|
  Rat   329 EGTEAAAATAGI-ATFCMLLPEEE--FTADHPFIFFIRHNPTANVLFLGRVCSP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 126/376 (34%)
Serpinb1aNP_001026812.1 serpinB1_LEI 1..379 CDD:381028 126/377 (33%)

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