DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpinf1

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_808788.1 Gene:Serpinf1 / 287526 RGDID:631369 Length:418 Species:Rattus norvegicus


Alignment Length:395 Identity:119/395 - (30%)
Similarity:193/395 - (48%) Gaps:61/395 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LATSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMR-----NVLKLPD 68
            ||.:|| .|..|.|:|.:...:..|::.|||||..|||...:||..:|...:.     :::..||
  Rat    54 LAAAVS-NFGYDLYRLRSGAVSTGNILLSPLSVATALSALSLGAEQRTESVIHRALYYDLINNPD 117

  Fly    69 DKKEVAAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAE--------- 124
                :.:.||:||:.:...||  ....|:||...:|.:        ||.||:|..|         
  Rat   118 ----IHSTYKELLASVTAPEK--NFKSASRIVFERKLR--------VKSSFVAPLEKSYGTRPRI 168

  Fly   125 -----AIDIVDPNKASSIVNNWVDNQTRGKIKDLVSSNDM-SKMELIVLNAIYFKGQWEYKFNPK 183
                 .||:.:       :||||..|.:|||..  |:.:| |.:.:::|...||||||..||:.:
  Rat   169 LTGNPRIDLQE-------INNWVQAQMKGKIAR--STREMPSALSILLLGVAYFKGQWATKFDSR 224

  Fly   184 LTKKRNFRVSDQKSVPVEMMSLFQS-FRAAHDSELGAKIIELPYRNSSLSMLIFLPDQV-DGLSE 246
            .|..::|.:.:.::|.|.|||..:: .|...||:|..||.:||. ..|:|::.|||..| ..|:.
  Rat   225 KTTLQDFHLDEDRTVRVPMMSDPKAILRYGLDSDLNCKIAQLPL-TGSMSIIFFLPLTVTQNLTM 288

  Fly   247 LEKKIVG-----FKPKLSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENSNV 306
            :|:.:..     ...:|..:...|.:||.|:.:...:...|..|.:|..|| |.||.. :....|
  Rat   289 IEESLTSEFVHDIDRELKTIQAVLTVPKLKLSYEGDVTNSLQDMKLQSLFE-SPDFSK-ITGKPV 351

  Fly   307 HVKKVIHKAFIEVNEEGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRET--IYFQGH 369
            .:.:|.|:|..|.|||||..::...|..||.:.|:.     ::.:.||.:|:||.:|  :.|.|.
  Rat   352 KLTQVEHRAAFEWNEEGAGTSSNPDLQPVRLTFPLD-----YHLNRPFIFVLRDTDTGALLFIGR 411

  Fly   370 FVKPN 374
            .:.|:
  Rat   412 ILDPS 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 116/389 (30%)
Serpinf1NP_808788.1 serpinF1_PEDF 41..413 CDD:381008 118/390 (30%)

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