DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpinb1b

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_766640.1 Gene:Serpinb1b / 282663 MGIID:2445361 Length:382 Species:Mus musculus


Alignment Length:379 Identity:120/379 - (31%)
Similarity:207/379 - (54%) Gaps:17/379 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKLPDDKKEVAA 75
            :|.:..|..:.:..|.:.:...|:..||.|:..:|:|.::||:..||.::...|.. |..:::.:
Mouse     5 SSANTLFTLELFHTLKESSPTGNIFFSPFSISSSLAMVFLGAKGSTAAQLSKTLHF-DSVEDIHS 68

  Fly    76 KYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNK-ASSIVN 139
            .::.|.:::.......||.||||:|..|.:..:|.:....:..:.|:..|:|....:: |...:|
Mouse    69 CFQSLTAEVSKLGASHTLKLANRLYGEKTYNFLPEFLASTQKMYSADLAAVDFQHASEDARKEIN 133

  Fly   140 NWVDNQTRGKIKDLVSSNDMSKM-ELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPVEMM 203
            .||..||.|||.:|::...:..| :|:::|||||||.||.:|..:.|....||::.:.:..|:||
Mouse   134 QWVKGQTEGKIPELLAKGVVDSMTKLVLVNAIYFKGIWEEQFMTRETINAPFRLNKKDTKTVKMM 198

  Fly   204 SLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVD----GLSELEKKIVGFK-------PK 257
            ...:.|...:.|:|..|::|:||:...|||:|.||:.::    ||.::|:::...|       ..
Mouse   199 YQKKKFPFGYISDLKCKVLEMPYQGGELSMVILLPEDIEDESTGLKKIEEQLTLGKLHEWTKHEN 263

  Fly   258 LSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEK-SADFKDLVENSNVHVKKVIHKAFIEVNE 321
            |..:||.::||:||:|....||..|..:|:||.|.. .||...:..:.::.|.|::||:|::|||
Mouse   264 LRNIDVHVKLPRFKMEESYILNSNLCCLGVQDLFSSGKADLSGMSGSRDLFVSKIVHKSFVDVNE 328

  Fly   322 EGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRET--IYFQGHFVKP 373
            :|.||||||..:.......||:.|.||..||||.:.||...|  :.|.|....|
Mouse   329 QGTEAAAATGGIIQVLCEKMPTPQEVFTVDHPFLFFIRHNPTANMIFFGRVCSP 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 119/376 (32%)
Serpinb1bNP_766640.1 serpinB1_LEI 1..382 CDD:381028 119/377 (32%)
CARD-binding motif (CBM). /evidence=ECO:0000250|UniProtKB:P30740 352..382 12/29 (41%)

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