DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpina3b

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_766612.1 Gene:Serpina3b / 271047 MGIID:2182835 Length:420 Species:Mus musculus


Alignment Length:390 Identity:111/390 - (28%)
Similarity:189/390 - (48%) Gaps:26/390 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KHLCLLLLATSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKL 66
            |.|..|.|| |::..||..||:.||.:|...|:..||..:..||:...:||:..|.:|:..|||.
Mouse    40 KQLDSLTLA-SINTDFAFSFYKELALKNPHKNIAFSPFGIATALNSLTLGAKGNTLEEILEVLKF 103

  Fly    67 ---PDDKKEVAAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDI 128
               ...:.::...:|.||.:|........:...|.::|.|..|::..:.:..:..:..|....:.
Mouse   104 NLTETSEADIHQGFKHLLQRLSHPGDQVQIRTGNALFVEKHLQILAEFKEKARALYHTEVFTANF 168

  Fly   129 VDPNKASSIVNNWVDNQTRGKIKDLVSSNDMSKMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVS 193
            ..|::|..::|:::.|||:||||:|||..| ....::::|.::||.:|...||...|....|.|.
Mouse   169 QQPHEAMKLINSYMSNQTQGKIKELVSDMD-GNTSMVIVNDLFFKAEWMVPFNSDDTFMGKFIVD 232

  Fly   194 DQKSVPVEMMSLFQSFRAAH--DSELGAKIIELPYRNSSLSMLIFLPD-----QVDGLSE---LE 248
            ..:.|.|.||.. ::.|..:  |.||...::||.|:.:..:|.| |||     ||:...:   |:
Mouse   233 RSRHVKVPMMKT-KNLRTPYFRDEELKCTVVELNYKGNGKAMFI-LPDQGKMQQVEASLQPGTLK 295

  Fly   249 KKIVGFKPKLSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENSNVHVKKVIH 313
            |.....:|:..|   .|.||||.:.....|..:|..:||::.|...||...:....|:.|.::||
Mouse   296 KWRKSLRPRKIK---ELHLPKFSLSQHYNLEDILPELGIRELFSTQADLSGITGVKNITVSEMIH 357

  Fly   314 KAFIEVNEEGAEAAAATALLFVRYSMPMPSSQMVF-NADHPFAYVIRDRET--IYFQGHFVKPNE 375
            ...:::.|:|.|..|.|   .|.|:......:.|| ..:..|.|::.|:..  |:..|..:.|:|
Mouse   358 STELDMTEKGTEGDAIT---IVGYNFMSAKLKPVFVKFEDQFLYIVLDQGDLWIHVMGKVINPSE 419

  Fly   376  375
            Mouse   420  419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 103/371 (28%)
Serpina3bNP_766612.1 SERPIN 51..414 CDD:294093 103/371 (28%)
RCL 367..392 8/27 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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