DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpina3n

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_113719.3 Gene:Serpina3n / 24795 RGDID:3747 Length:418 Species:Rattus norvegicus


Alignment Length:369 Identity:113/369 - (30%)
Similarity:189/369 - (51%) Gaps:21/369 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLATSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKL---PDD 69
            |...|::..||...|:.||..|...|::.||||:..||::..:||:..:.:|:...||.   ...
  Rat    45 LTLASINTDFAFSLYKKLALRNPDKNVVFSPLSISAALAVVSLGAKGNSMEEILEGLKFNLTETP 109

  Fly    70 KKEVAAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNKA 134
            :.|:...:..||.:|........:|..|.:::.|:.|::..:.:..|..:.|||...|.....:|
  Rat   110 ETEIHRGFGHLLQRLSQPRDEIQISTGNALFIEKRLQVLAEFQEKAKALYQAEAFTADFQQSREA 174

  Fly   135 SSIVNNWVDNQTRGKIKDLVSSNDMSKMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVP 199
            ..::|::|..||:|||:.|: :|...|..::::|.|||||:|:..|:|:.|.:..|....::.|.
  Rat   175 KKLINDYVSKQTQGKIQGLI-TNLAKKTSMVLVNYIYFKGKWKVPFDPRDTFQSEFYSGKRRPVK 238

  Fly   200 VEMMSLFQ-SFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKKIVGFKPK-LSKMD 262
            |.||.|.. :.....|.||...::||.|..:: |.|..||||    .::::.....:|: |.:..
  Rat   239 VPMMKLEDLTTPYVRDEELNCTVVELKYTGNA-SALFILPDQ----GKMQQVEASLQPETLRRWK 298

  Fly   263 VTLR--------LPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENSNVHVKKVIHKAFIEV 319
            .:||        ||||.|.....|..||..:||::.|...||...:..:.::.|.:|:|||.::|
  Rat   299 DSLRPSMIDELYLPKFSISADYNLEDVLPELGIKEVFSTQADLSGITGDKDLMVSQVVHKAVLDV 363

  Fly   320 NEEGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRET 363
            .|.|.||||||.:.||..|..:  ..::...|.||..:|.|.||
  Rat   364 AETGTEAAAATGVKFVPMSAKL--DPLIIAFDRPFLMIISDTET 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 111/363 (31%)
Serpina3nNP_113719.3 serpinA3_A1AC 37..418 CDD:381019 113/369 (31%)
RCL 367..394 10/28 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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