DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28F and Serpina3f

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_001028507.2 Gene:Serpina3f / 238393 MGIID:2182838 Length:445 Species:Mus musculus


Alignment Length:377 Identity:118/377 - (31%)
Similarity:195/377 - (51%) Gaps:35/377 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLLATSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMR-----NVLKL 66
            |.||:| :..||...|:.|..:|...|::.||.|:..||::..:||::.|.:|:.     |:.:.
Mouse    35 LTLASS-NTDFAFSLYKELVLKNPDENVVFSPFSICTALALLSLGAKSNTLKEILEGLKFNLTET 98

  Fly    67 PDDKKEVAAKY-KDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVD 130
            |:.......:| .||||:...:.:::|   .:.:::.|..|::..:.:..:..:.|||...|...
Mouse    99 PEPDIHQGFRYLLDLLSQPGNQVQIST---GSALFIEKHLQILAEFKEKARALYQAEAFTADFQQ 160

  Fly   131 PNKASSIVNNWVDNQTRGKIKDLVSSNDMSKMELIVL-NAIYFKGQWEYKFNPKLTKKRNFRVSD 194
            |.:|:.::|::|.|.|:||||:|:|  |:.|..|:|| |.|||||:||..|:|..|.|..|.:.:
Mouse   161 PLEATKLINDYVSNHTQGKIKELIS--DLDKRTLMVLVNYIYFKGKWEMPFDPDDTCKSEFYLDE 223

  Fly   195 QKSVPVEMMSL----FQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKKIV--- 252
            .:||.|.||.:    ...||   |.||...::||.|..::.:|.| |||| ..:.::|..:.   
Mouse   224 NRSVKVPMMKINNLTTPYFR---DEELSCTVVELKYTGNASAMFI-LPDQ-GKMQQVEASLQPET 283

  Fly   253 ------GFKPKLSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENSNVHVKKV 311
                  ..||:|..   .|.||||.|.....|..:|..:||::.|...||...:....::...:|
Mouse   284 LRNWKDSLKPRLIN---ELCLPKFSISTDYSLEHILPELGIRELFSTQADLSAITGTKDLRTSQV 345

  Fly   312 IHKAFIEVNEEGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRET 363
            :|||.::|.|.|.||||.|....::....:..|..:: .|.||..:|.|..|
Mouse   346 VHKAVLDVAETGTEAAAGTGYQNLQCCQGVIYSMKIY-FDRPFLMIISDTNT 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 115/372 (31%)
Serpina3fNP_001028507.2 serpinA3_A1AC 27..409 CDD:381019 118/377 (31%)
RCL 357..382 7/24 (29%)

Return to query results.
Submit another query.