DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpinb6b

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_035584.1 Gene:Serpinb6b / 20708 MGIID:894688 Length:377 Species:Mus musculus


Alignment Length:365 Identity:134/365 - (36%)
Similarity:202/365 - (55%) Gaps:27/365 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 ENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKLPDDK------KEVAAKYKDLLSKLEG 86
            |:::.|::.||:||..||:|.:|||:..||.:|...|.|  ||      ::|...::.||::...
Mouse    21 EDSSRNVLFSPISVSSALAMVFMGAKGTTASQMAQALSL--DKCSGKGGRDVHQGFQSLLTETNK 83

  Fly    87 REKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNKAS-SIVNNWVDNQTRGKI 150
            ......|..|||::..|.|.::.|:....:..:.||.|.:|.....:.| ..:|.||..:|..||
Mouse    84 TGTQYVLRTANRLFGEKTFDILASFKDSCRKFYEAEMEELDFKGATEQSRQHINAWVAKKTEDKI 148

  Fly   151 KDLVSSNDM-SKMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPVEMMSLFQSFRAAHD 214
            .:|:||..: |...|:::|||||||.||.:||.:.|::..|.|:.....||:||....:|:..:.
Mouse   149 TELLSSGSVNSNTPLVLVNAIYFKGNWEKQFNKEDTQEMPFNVTKDVVKPVQMMFQKSTFKMTYV 213

  Fly   215 SELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKKIVGFK----PKLSKM---DVTLRLPKFKI 272
            .|:...|:.|||..:.|:|:|.|||:...||.:||:|...|    .:|.||   :|.:.|||||:
Mouse   214 EEISTNILLLPYVGNELNMIIMLPDEHIELSMVEKEITYKKFIEWTRLDKMEEEEVEVFLPKFKL 278

  Fly   273 EFFAQLNKVLVAMGIQDAFEKS-ADFKDLVENSNVHVKKVIHKAFIEVNEEGAEAAAATAL-LFV 335
            |....:..||..:|:.||||:. |||..:.....:.:.|||||:|:||||||.|||||||. :..
Mouse   279 EENYDMKDVLCRLGMTDAFEEGMADFSGIASKEGLFLSKVIHKSFVEVNEEGTEAAAATAANIGF 343

  Fly   336 RYSMPMPSSQMVFNADHPFAYVIRDRET--IYFQGHFVKP 373
            |..:|      .|.|:|||.:.|:...|  |.|.|.|..|
Mouse   344 RCMVP------YFCANHPFLFFIQHSRTSGIVFCGRFSSP 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 132/360 (37%)
Serpinb6bNP_035584.1 serpin 1..377 CDD:393296 133/363 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.830

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