DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpina1b

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_033270.3 Gene:Serpina1b / 20701 MGIID:891970 Length:413 Species:Mus musculus


Alignment Length:379 Identity:104/379 - (27%)
Similarity:186/379 - (49%) Gaps:26/379 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LATSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKL---PDDK 70
            :||::. .||...|:.|..::..:|:..||:|:..|.:|..:|::..|..::...|:.   ...:
Mouse    44 IATNLG-DFAISLYRELVHQSNTSNIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSE 107

  Fly    71 KEVAAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNKAS 135
            .::...::.||..|...:....||..|.::||...:||..:.:..|:.:.||..:::..:..:|.
Mouse   108 ADIHKSFQHLLQTLNRPDSELQLSTGNGLFVNNDLKLVEKFLEEAKNHYQAEVFSVNFAESEEAK 172

  Fly   136 SIVNNWVDNQTRGKIKDLVSSNDMSKMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPV 200
            .::|::|:..|:|||.:.|...|...: ..:.|.|.|||:|:..|:|:.|::..|.|....:|.|
Mouse   173 KVINDFVEKGTQGKIVEAVKELDQDTV-FALANYILFKGKWKKPFDPENTEEAEFHVDKSTTVKV 236

  Fly   201 EMMSLFQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDG-LSELEKKIVGFKPKLSKM--- 261
            .||.|.......|.|.|.:.::.:.|..:: |.:..||:  || :..||:.:  .|..:||:   
Mouse   237 PMMMLSGMLDVHHCSILSSWVLLMDYAGNA-SAVFLLPE--DGKMQHLEQTL--NKELISKILLN 296

  Fly   262 ----DVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLV-ENSNVHVKKVIHKAFIEVNE 321
                .|.:.:|:..|.....|..::..:||...|...||...:. ||:.:.:.|.:|||.:.::|
Mouse   297 RRRRLVQIHIPRLSISGDYNLKTLMSPLGITRIFNNGADLSGITEENAPLKLSKAVHKAVLTIDE 361

  Fly   322 EGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRET--IYFQGHFVKP 373
            .|.||||||....|..|||     .:...||||.::|.:..|  ..|.|..|.|
Mouse   362 TGTEAAAATVFEAVPMSMP-----PILRFDHPFLFIIFEEHTQSPIFVGKVVDP 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 100/369 (27%)
Serpina1bNP_033270.3 SERPIN 53..410 CDD:214513 99/367 (27%)
RCL 368..387 7/23 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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