DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpinf1

DIOPT Version :9

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_035470.3 Gene:Serpinf1 / 20317 MGIID:108080 Length:417 Species:Mus musculus


Alignment Length:388 Identity:124/388 - (31%)
Similarity:194/388 - (50%) Gaps:47/388 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LATSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKL-----PD 68
            ||.:|| .|..|.|:|.:..:...|::.|||||..|||...:||..:|...:...|..     ||
Mouse    53 LAAAVS-NFGYDLYRLRSSASPTGNVLLSPLSVATALSALSLGAEHRTESVIHRALYYDLITNPD 116

  Fly    69 DKKEVAAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAE-------AI 126
                :.:.||:||:.:...||  .|..|:||...:|.:        ||.||:|..|       .|
Mouse   117 ----IHSTYKELLASVTAPEK--NLKSASRIVFERKLR--------VKSSFVAPLEKSYGTRPRI 167

  Fly   127 DIVDPNKASSIVNNWVDNQTRGKIKDLVSSNDM-SKMELIVLNAIYFKGQWEYKFNPKLTKKRNF 190
            ...:|......:||||..|.:|||..  |:.:| |.:.:::|...||||||..||:.:.|..::|
Mouse   168 LTGNPRVDLQEINNWVQAQMKGKIAR--STREMPSALSILLLGVAYFKGQWVTKFDSRKTTLQDF 230

  Fly   191 RVSDQKSVPVEMMSLFQS-FRAAHDSELGAKIIELPYRNSSLSMLIFLPDQV-DGLSELEKKIVG 253
            .:.:.::|.|.|||..:: .|...||:|..||.:||. ..|:|::.|||..| ..|:.:|:.:..
Mouse   231 HLDEDRTVRVPMMSDPKAILRYGLDSDLNCKIAQLPL-TGSMSIIFFLPLTVTQNLTMIEESLTS 294

  Fly   254 -----FKPKLSKMDVTLRLPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENSNVHVKKVIH 313
                 ...:|..:...|.:||.|:.|..:|.|.|..|.:|..|| |.||.. :....|.:.:|.|
Mouse   295 EFIHDIDRELKTIQAVLTVPKLKLSFEGELTKSLQDMKLQSLFE-SPDFSK-ITGKPVKLTQVEH 357

  Fly   314 KAFIEVNEEGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVIRDRET--IYFQGHFVKPN 374
            :|..|.|||||.::.:..|..||.:.|:.     ::.:.||.:|:||.:|  :.|.|..:.|:
Mouse   358 RAAFEWNEEGAGSSPSPGLQPVRLTFPLD-----YHLNQPFLFVLRDTDTGALLFIGRILDPS 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 SERPIN 14..370 CDD:238101 120/377 (32%)
Serpinf1NP_035470.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 17..41
PEDF 39..414 CDD:239007 123/385 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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