DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and srp-2

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:NP_503318.1 Gene:srp-2 / 178586 WormBaseID:WBGene00005643 Length:359 Species:Caenorhabditis elegans


Alignment Length:123 Identity:27/123 - (21%)
Similarity:48/123 - (39%) Gaps:41/123 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 LRPPRNFSELSLSK----SIPSNKTISHLQADLPYFSIRPASENDIFTISGGAGGSTYNSISMTP 267
            |.||.||..|...|    :|.|:..|..: ..||                   ||:..:.:::| 
 Worm    18 LLPPYNFFPLEDRKGPRTAIKSSLHIPRV-VKLP-------------------GGARRSCLTLT- 61

  Fly   268 EVPAISYSNLPKNYLETPV--IEKYR--ESVSLYS--IQTAGINRQSQTDDLSMPRYY 319
               .:.:|  |:..|:.|:  :.:.|  ..:.|:.  |.:..:||..:     .|||:
 Worm    62 ---FVIFS--PRGSLKLPIPKVSRLRVISKILLFRVLISSTMLNRCPK-----HPRYH 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 27/123 (22%)
srp-2NP_503318.1 serpinL_nematode 7..358 CDD:381047 27/123 (22%)

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