DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and Serpina3c

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:XP_011242304.1 Gene:Serpina3c / 16625 MGIID:102848 Length:436 Species:Mus musculus


Alignment Length:386 Identity:115/386 - (29%)
Similarity:195/386 - (50%) Gaps:36/386 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLATSVSCRFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMR-----NVLKLP 67
            |...|::..||...|:.||.:|...|::.||||:..||::..:||:..|.:|:.     |:.:.|
Mouse    64 LTLASINTDFAFSLYKKLALKNPDTNIVFSPLSISAALAIVSLGAKGNTLEEILEGLNFNLTETP 128

  Fly    68 DDKKEVAAKYKDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPN 132
            :  .::...:..||.:|....:...:|..:.::|.|..|::..:.:..:..:.|||...|...|.
Mouse   129 E--ADIHQGFGHLLQRLSHPGEQVQISTGSALFVEKHLQILAEFQEKARALYQAEAFTADFQQPL 191

  Fly   133 KASSIVNNWVDNQTRGKIKDLVSSNDMSKMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKS 197
            :|:.::|::|.|||:.|||.|:|..|...: ::::|.|||||:|:..|||:.|.:..|.:..::|
Mouse   192 EATKLINDYVSNQTQRKIKGLISDLDTDTL-MVLVNYIYFKGKWKMPFNPRDTFESEFYLDVKRS 255

  Fly   198 VPVEMMSL----FQSFRAAHDSELGAKIIELPYRNSSLSMLIFLPDQVDGLSELEKKIVGFKPK- 257
            |.|.||.:    ...||   |.||...::||.|:.:: |.|..||||    ..:::.....:|: 
Mouse   256 VKVPMMKIKTLTTPYFR---DEELSCTVVELKYKGNA-SALFILPDQ----GRMQQVEASLQPET 312

  Fly   258 LSKMDVTLR--------LPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENSNVHVKKVIHK 314
            |.|...:||        ||||.|.....|..:|..:||::.|.|.||...:....::.|.:::||
Mouse   313 LRKWKNSLRPRKMGELYLPKFSISTDYSLKNILPELGIKEIFSKQADLSGITGTKDLIVSQMVHK 377

  Fly   315 AFIEVNEEGAEAAAATALLFVRYSMPMPSSQMVFNADHPFAYVI--RDRETIYFQGHFVKP 373
            |.::|.|.|.|..|||.   |.:.:....:.:.||  ..|..||  .|.:|..|......|
Mouse   378 AVLDVAETGTEGVAATG---VNFRILSRRTSLWFN--RTFLMVISHTDVQTTLFIAKITHP 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 113/380 (30%)
Serpina3cXP_011242304.1 serpinA3_A1AC 56..434 CDD:381019 115/386 (30%)

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