DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28F and serpina1

DIOPT Version :10

Sequence 1:NP_524957.2 Gene:Spn28F / 49807 FlyBaseID:FBgn0028987 Length:375 Species:Drosophila melanogaster
Sequence 2:XP_004917137.1 Gene:serpina1 / 100145012 XenbaseID:XB-GENE-5804366 Length:485 Species:Xenopus tropicalis


Alignment Length:369 Identity:113/369 - (30%)
Similarity:196/369 - (53%) Gaps:20/369 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RFADDFYQLLAKENAANNLISSPLSVEIALSMAYMGARAKTAQEMRNVLKLPDDK---KEVAAKY 77
            :||...::.:..::.:.|:..||:|:..||:|..:||||.|..::...|...:.|   :|:...:
 Frog   124 QFAFKLFRQVVADHPSENIFFSPVSISTALAMLSLGARADTLNQIIEGLNFNNTKITEEEIHNGF 188

  Fly    78 KDLLSKLEGREKVATLSLANRIYVNKKFQLVPSYNQMVKDSFMAEAEAIDIVDPNKASSIVNNWV 142
            :.||..|...::...|:..|.::::...:|:..:...||..:.:||.:.|..:..:|...:|::|
 Frog   189 QHLLHMLNDPDRELQLNSGNALFIDNNVKLIQQFIDDVKKYYESEAFSTDFNNAEEAKKQINSYV 253

  Fly   143 DNQTRGKIKDLVSSNDMSKMELIVLNAIYFKGQWEYKFNPKLTKKRNFRVSDQKSVPVEMMSLFQ 207
            :.||.|||.||:||.|.:.: |.::|.|:|:|:||..|..|.|:...|.|.:..:|.|.||....
 Frog   254 EKQTHGKIVDLLSSVDKNAV-LYLINYIFFRGKWEKPFEEKFTQDGIFHVDENTNVTVPMMRRNG 317

  Fly   208 SFRAAHDSELGAKIIELPYRNSSLSMLIFLPD-----QVDGLSELEKK-IVGFKPKLSKMDVTLR 266
            .:..|.|.:||..::::||:.::.::.| |||     ||:  ..|||. |:.:|.:.....:.|.
 Frog   318 MYNVAFDEKLGCTVVQIPYKGNATALFI-LPDEGKLRQVE--EALEKSTIMSWKKQFRYQSIELT 379

  Fly   267 LPKFKIEFFAQLNKVLVAMGIQDAFEKSADFKDLVENSNVHVKKVIHKAFIEVNEEGAEAAAATA 331
            :|||.|.....|.:.|...|:.|.|.::||...:||.:.:.|.|.:|||.:.|:|.|.|||||||
 Frog   380 IPKFSIMATLDLIEELKKFGVTDVFSQNADLSGIVEGTPLKVSKAVHKAGLSVDETGTEAAAATA 444

  Fly   332 LLFVRYSMPMPSSQMVFNADHPFAYVIRD--RETIYFQGHFVKP 373
            ...:...:|   ..::||  ..|..:|.|  .::|.|....|.|
 Frog   445 FEIMPMMIP---PHILFN--RAFVVIIYDPIPKSILFVAKVVNP 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28FNP_524957.2 serpin42Dd-like_insects 12..373 CDD:381070 112/367 (31%)
serpina1XP_004917137.1 serpin 115..484 CDD:476815 113/369 (31%)

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