DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and SRP3

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_176586.1 Gene:SRP3 / 842706 AraportID:AT1G64030 Length:385 Species:Arabidopsis thaliana


Alignment Length:394 Identity:112/394 - (28%)
Similarity:183/394 - (46%) Gaps:90/394 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LLAKENADKNLITSPLSVEIALSLAYMGARGK-TAQEMRDVLKLP--DDKKEVAAKFKDLLSKLE 85
            :|:....|.|:|.||.|:..|:::...|..|. .:.::...|:..  |:.|.|   |::|.|.:.
plant    21 VLSSAPKDSNVIFSPASINSAITMHAAGPGGDLVSGQILSFLRSSSIDELKTV---FRELASVVY 82

  Fly    86 GRESVA---ILSLANRIYVNNKFKLVPEYNQMVKDSFKA---------EAEAISANNPKITASIV 138
            ...|..   .::.||.::::......|::..:.::.|||         |||.:...        |
plant    83 ADRSATGGPKITAANGLWIDKSLPTDPKFKDLFENFFKAVYVPVDFRSEAEEVRKE--------V 139

  Fly   139 NKWVDTQTSGKIRDLVMPSDVANLV-LVILNAIYFKGQWQKKFNTEQTK-SDFHISDQKSVPVQM 201
            |.||:..|:..|:||:....|.:|. .:..||:.|||.|::.|....|: :||::.:..||.|  
plant   140 NSWVEHHTNNLIKDLLPDGSVTSLTNKIYANALSFKGAWKRPFEKYYTRDNDFYLVNGTSVSV-- 202

  Fly   202 MSLVRPFGVSYDREL-----GANVIELPYR------NSNLSMVIFLPDKVDGLPELEKKMVGFTP 255
                 ||..||:.:.     |..|:.|||:      |...||..:||||.|||.:|.:||.. ||
plant   203 -----PFMSSYENQYVRAYDGFKVLRLPYQRGSDDTNRKFSMYFYLPDKKDGLDDLLEKMAS-TP 261

  Fly   256 KLININV--------HLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGVVH 312
            ..::.::        ..|:|||||||...:..||..:|::..                   .:.|
plant   262 GFLDSHIPTYRDELEKFRIPKFKIEFGFSVTSVLDRLGLRSM-------------------SMYH 307

  Fly   313 KAFLEVNEEGSEAAAATA-------VVFRYKSIRSPP--MDFNVNHPFAYVIRDAE--NIYFQGH 366
            ||.:|::|||:|||||||       :.|     ..||  :||..:|||.::||:.:  .:.|.|.
plant   308 KACVEIDEEGAEAAAATADGDCGCSLDF-----VEPPKKIDFVADHPFLFLIREEKTGTVLFVGQ 367

  Fly   367 FVNP 370
            ..:|
plant   368 IFDP 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 111/392 (28%)
SRP3NP_176586.1 serpinP_plants 8..371 CDD:381001 111/392 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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