DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and AT1G62170

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001185292.1 Gene:AT1G62170 / 842513 AraportID:AT1G62170 Length:466 Species:Arabidopsis thaliana


Alignment Length:443 Identity:109/443 - (24%)
Similarity:191/443 - (43%) Gaps:108/443 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLLLATSVSCRFTDDLYQLLAKEN---------------ADKNLITSPLSVEIALSLAYMGARGK 55
            |::.:.|:|   ..|:.:.:.|:|               .:.|.:.||.|:..||::....:.|:
plant    52 LVIASPSLS---NIDVGEAMKKQNDVAIFLTGIVISSVAKNSNFVFSPASINAALTMVAASSGGE 113

  Fly    56 TAQEMRD-VLKL--PDDKKEVAAKFKDLLSKL------EGRESVAILSLANRIYVNNKFKLVPEY 111
            ..:|:|. :|..  .....|:.|.|:::.|.:      :|...:|::   |.::::....:.|..
plant   114 QGEELRSFILSFLKSSSTDELNAIFREIASVVLVDGSKKGGPKIAVV---NGMWMDQSLSVNPLS 175

  Fly   112 NQMVKDSFKAEAEAIS-------ANNPKITASI---------------------------VNKWV 142
            ..:.|:.|.|....:.       .|...:..|:                           ||.|.
plant   176 KDLFKNFFSAAFAQVDFRSKCNVLNKLGLAVSLLESIFHISTLFDFKFALIRSAEEVRTEVNAWA 240

  Fly   143 DTQTSGKIRDLVMPSDVANLV-LVILNAIYFKGQWQKKFNTEQTK-SDFHISDQKSVPVQMM-SL 204
            .:.|:|.|:||:....|.:|. .|..:|:||||.|::|::...|| ..|::.:..||.|..| |.
plant   241 SSHTNGLIKDLLPRGSVTSLTDRVYGSALYFKGTWEEKYSKSMTKCKPFYLLNGTSVSVPFMSSF 305

  Fly   205 VRPFGVSYDRELGANVIELPYR------NSNLSMVIFLPDKVDGLPELEKKMVGFTPKLIN---- 259
            .:.:..:||   |..|:.||||      |.|.:|.|:||||...|.:|.::|.. ||..::    
plant   306 EKQYIAAYD---GFKVLRLPYRQGRDNTNRNFAMYIYLPDKKGELDDLLERMTS-TPGFLDSHNP 366

  Fly   260 ---INV-HLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGVVHKAFLEVNE 320
               :.| ..|:|||||||               .|:.|:.|:|...:...:     .|..:|::|
plant   367 ERRVKVGKFRIPKFKIEF---------------GFEASSAFSDFELDVSFY-----QKTLIEIDE 411

  Fly   321 EGSEAAAATAVVFRYKSIR-SPPMDFNVNHPFAYVIRDAE--NIYFQGHFVNP 370
            :|:||...||....|.... ..|:||..:|||.::||:.:  .:.|.|...:|
plant   412 KGTEAVTFTAFRSAYLGCALVKPIDFVADHPFLFLIREEQTGTVLFAGQIFDP 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 106/433 (24%)
AT1G62170NP_001185292.1 SERPIN 69..464 CDD:294093 104/421 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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