DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and SRP2

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_179060.1 Gene:SRP2 / 815941 AraportID:AT2G14540 Length:407 Species:Arabidopsis thaliana


Alignment Length:398 Identity:117/398 - (29%)
Similarity:178/398 - (44%) Gaps:76/398 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLLLATSVSCRFTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKLPDDK 70
            |||:...:|.         :||   :.|.:.||.|:...|::.......||.:............
plant    43 LLLVGKVISA---------VAK---NSNCVFSPASINAVLTVTAANTDNKTLRSFILSFLKSSST 95

  Fly    71 KEVAAKFKDLLSKL--EGRESVA-ILSLANRIYVNNKFKLVPEYNQMVKDSFKA---------EA 123
            :|..|.|.:|.|.:  :|.|:.. .::..|.:::.......|::..:..:.|||         :|
plant    96 EETNAIFHELASVVFKDGSETGGPKIAAVNGVWMEQSLSCNPDWEDLFLNFFKASFAKVDFRHKA 160

  Fly   124 EAISANNPKITASIVNKWVDTQTSGKIRDLVMPSDVANLVLVIL-NAIYFKGQWQKKFNTEQTK- 186
            |.:..:        ||.|....|:..|::::....|.:|...|. ||:||||.|:|.|:...|: 
plant   161 EEVRLD--------VNTWASRHTNDLIKEILPRGSVTSLTNWIYGNALYFKGAWEKAFDKSMTRD 217

  Fly   187 SDFHISDQKSVPVQMM-SLVRPFGVSYDRELGANVIELPYR------NSNLSMVIFLPDK---VD 241
            ..||:.:.|||.|..| |..:.|..:||   |..|:.||||      |...||.::||||   :|
plant   218 KPFHLLNGKSVSVPFMRSYEKQFIEAYD---GFKVLRLPYRQGRDDTNREFSMYLYLPDKKGELD 279

  Fly   242 GLPELEKKMVGFTPKLI---NINV-HLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVAN 302
            .|.|......||....|   .::| ..|:|||||||               .|:.|:.|||...|
plant   280 NLLERITSNPGFLDSHIPEYRVDVGDFRIPKFKIEF---------------GFEASSVFNDFELN 329

  Fly   303 SGAHVGGVVHKAFLEVNEEGSEAAAATAVVFRYKSIRSPP---MDFNVNHPFAYVIRDAE--NIY 362
            ...|     .||.:|::|||:||||||.||....|....|   :||..:|||.::||:.:  .:.
plant   330 VSLH-----QKALIEIDEEGTEAAAATTVVVVTGSCLWEPKKKIDFVADHPFLFLIREDKTGTLL 389

  Fly   363 FQGHFVNP 370
            |.|...:|
plant   390 FAGQIFDP 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 113/388 (29%)
SRP2NP_179060.1 SERPIN 36..397 CDD:294093 116/396 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H76659
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
OMA 1 1.010 - - QHG57242
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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