DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn38F and zgc:174259

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_021331992.1 Gene:zgc:174259 / 791587 ZFINID:ZDB-GENE-080213-10 Length:410 Species:Danio rerio


Alignment Length:371 Identity:125/371 - (33%)
Similarity:192/371 - (51%) Gaps:24/371 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FTDDLYQLLAKENAD---KNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKLPD---DKKEVAA 75
            |...||:.|. |:.|   ||:..||.||.:|||...:||.|.|.|::...:....   ..:|:..
Zfish    43 FAFHLYKRLI-ESPDYQSKNIFFSPFSVSMALSELSLGAGGDTKQQLLSGIGYSSAIFSTEEMHQ 106

  Fly    76 KFKDLLSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISANNPKITASIVNK 140
            .|..||..:..|..|.| .:...:|.:::||...::.:.:|:.:.::...:.. :.|.|...:||
Zfish   107 LFHSLLEDIGNRTGVDI-DVGTALYASDRFKPHSKFLEDMKEFYHSDGFTVDF-SVKETVDQINK 169

  Fly   141 WVDTQTSGKIRDLVMPSDVANLVLVILNAIYFKGQWQKKFNTEQT-KSDFHISDQKSVPVQMMSL 204
            :|:.:|.|||...|...| |:..:|:|..|||||:|.|.||.:.| :|.|||.|:.:||||||..
Zfish   170 YVEEKTHGKINQAVDDLD-ADTFMVLLTYIYFKGKWDKPFNPKTTSESTFHIDDKTTVPVQMMHQ 233

  Fly   205 VRPFGVSYDRELGANVIELPYRNSNLSMVIFLPDKVDG---LPELE-----KKMVGFTPKLININ 261
            .....|.||.||...|:.|.| |.:.||.:.:||...|   :.:||     :.:..:...:....
Zfish   234 YERLKVYYDAELSTKVLCLDY-NDSFSMFLAVPDVHMGRKTIKDLEMTVSRQHVEKWRRSVSERK 297

  Fly   262 VHLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGVVHKAFLEVNEEGSEAA 326
            |.:.:||..::.|..|:.:|..||:.|.|...|||.. |:....:|..|:|||.|:::|:|:.||
Zfish   298 VDIYVPKLSLKTSYSLKDILKGMGMADMFSDKADFTG-VSEEKIYVSKVLHKATLDIDEKGTTAA 361

  Fly   327 AATAVVFRYKSIRSPPMDFNVNHPFAYVIRDA--ENIYFQGHFVNP 370
            |.|.|..|:.|. ||..|.:.:.||...|.|.  :||.|.|..|||
Zfish   362 AVTTVHLRFMSY-SPMSDLSFDRPFMIFITDQTNDNILFVGKVVNP 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 123/369 (33%)
zgc:174259XP_021331992.1 alpha-1-antitrypsin_like 39..403 CDD:239011 122/366 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.