DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and Serpina3a

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001161177.1 Gene:Serpina3a / 74069 MGIID:1921319 Length:422 Species:Mus musculus


Alignment Length:376 Identity:108/376 - (28%)
Similarity:188/376 - (50%) Gaps:24/376 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SVSCRFTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKL---PDDKKEV 73
            |::..|...||:.||.:|..||::.||||:..||:|..:||:..|.:|:.:.||.   ...:.::
Mouse    51 SINTDFAFSLYKKLALKNPHKNIVFSPLSISAALALMSLGAKDNTLEEILEGLKFNLTETPEADI 115

  Fly    74 AAKFKDLLSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISANNPKITASIV 138
            ...|..||..|...|:...::..|.::::...:::.|:.:..:..:||||.......|:....::
Mouse   116 HQNFGHLLQMLIQPENQVQINAGNALFIDKHLQILTEFKEKARALYKAEAFTADFQLPREATKLI 180

  Fly   139 NKWVDTQTSGKIRDLVMPSDV-ANLVLVILNAIYFKGQWQKKFNTEQT-KSDFHISDQKSVPVQM 201
            |.:|..||.|||::||  ||: .|..:.::|.:.|:|.|...|:.|.| ..:|.:..:::|.|.|
Mouse   181 NDYVRKQTQGKIKELV--SDLHRNTSMALVNFLNFQGFWNVTFDPEDTFLGNFTLDRKRTVNVPM 243

  Fly   202 MSLVRPFGVSY--DRELGANVIELPYRNSNLSMVIFLPDK------VDGL-PE-LEKKMVGFTPK 256
            |. ......:|  |.|:.:.|:||.| ..|.|.:..|||:      .|.| |: |.|......|:
Mouse   244 MK-TEELTTNYFRDEEMQSTVMELNY-IGNASFLFILPDQGRIQHVEDSLQPQSLRKWRKSLRPR 306

  Fly   257 LININVHLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGVVHKAFLEVNEE 321
            :::   .|.||||.:.....|..:|..:||::.|.|.||.:.:.......|..::|:|.|:|.|.
Mouse   307 MLD---ELSLPKFSLSQDYNLNDILPELGIKEVFSTQADLSGITGAKNIRVSQMIHQAALDVTET 368

  Fly   322 GSEAAAATAVVFRYKSIRSPPMDFNVNHPFAYVIRDA--ENIYFQGHFVNP 370
            .:||...|...:.::|.:.......|:..|.|:|.|.  ::|...|..:||
Mouse   369 HTEADVITIARYNFQSAKIKAKIVKVDREFLYLILDPMFKSISVMGKVINP 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 105/372 (28%)
Serpina3aNP_001161177.1 SERPIN 53..416 CDD:294093 105/369 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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