DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and serpine3

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001116709.1 Gene:serpine3 / 556612 ZFINID:ZDB-GENE-050309-223 Length:417 Species:Danio rerio


Alignment Length:413 Identity:125/413 - (30%)
Similarity:200/413 - (48%) Gaps:54/413 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YLCLLL-----LATSV-SCRFTD-------DLYQLLAKENADKNLITSPLSVEIALSLAYMGARG 54
            ::||.|     :|.|| |..|:|       .|||.|.:.....|||.||.||.:.|.|..:||||
Zfish    10 FICLWLVDLCHVANSVLSSSFSDLHTQFGISLYQTLTETENKSNLIVSPASVSLCLGLLQLGARG 74

  Fly    55 KTAQEMRDVLKLPDDKKEVAAKFKDLLSKLEG---RESVAI-LSLANRIYVNNKFKLVPEYNQMV 115
            .|..::...|..  |..:|  :.:::||:.:|   ..|..: |.|||.:::....||:||:.|..
Zfish    75 NTLVQLEGTLGY--DVNDV--RVQNILSRPQGDLANSSEGLRLQLANALFIQTGVKLLPEFTQHA 135

  Fly   116 KDSFKAEAEAISANNPKITASIVNKWVDTQ---------------TSGKIRDLVMPSDVANLVLV 165
            .........:::.:||..|.|.:.:|...|               :||:..:......:  |.:.
Zfish   136 LGWGNTSLLSVNFSNPNHTHSRLQQWAHYQSKADDHLQTREELHHSSGEEEEATRQDHL--LYMA 198

  Fly   166 ILNAIYFKGQWQKKF-NTEQTKSDFHISDQKSVPVQMMSLVRPFGVSYDR---ELGANVIELPYR 226
            :::.:.|.|.|||:| .||.....|..||..:|.|.||.......:.:.|   |....|:||||.
Zfish   199 LVSTLVFHGAWQKQFLFTETQNLPFTFSDGSTVKVPMMYQSSEVNIGHFRLPSEQEYTVLELPYL 263

  Fly   227 NSNLSMVIFLP-DKVDGLPELEKKM----VG-FTPKLININVHLRLPKFKIEFSARLEQVLIAMG 285
            :.:|.:::.|| |:...|.:|||::    || :...|....:.:.||:||::....|:.||.::|
Zfish   264 DHSLRLLVALPSDRKTPLSQLEKQITARAVGLWDTGLRRTKMDIFLPRFKMQSKINLKPVLQSLG 328

  Fly   286 IQDAFKTS-ADFNDLVANSGAHVGGVVHKAFLEVNEEGSEAAAATAVVFRYKSIRSPPMDFNVNH 349
            :.|.|..| |||..:....|..|....|:|.:||.|.|::||:|||:|...:| ||..  |..:.
Zfish   329 VSDIFSPSAADFRGISDTDGIFVSEAFHEARIEVTEAGTKAASATAMVLLKRS-RSAV--FKADR 390

  Fly   350 PFAYVIRDAE--NIYFQGHFVNP 370
            ||.:::|...  ::.|.|..|||
Zfish   391 PFLFILRQISTGSLLFIGRVVNP 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 117/394 (30%)
serpine3NP_001116709.1 Serpin 35..413 CDD:278507 114/386 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.110

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