DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn38F and SERPINF1

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001316832.1 Gene:SERPINF1 / 5176 HGNCID:8824 Length:418 Species:Homo sapiens


Alignment Length:388 Identity:106/388 - (27%)
Similarity:187/388 - (48%) Gaps:52/388 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LATSVSCRFTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMR-----DVLKLPD 68
            ||.:|| .|..|||::.:..:...|::.|||||..|||...:||..:|...:.     |::..||
Human    54 LAAAVS-NFGYDLYRVRSSTSPTTNVLLSPLSVATALSALSLGAEQRTESIIHRALYYDLISSPD 117

  Fly    69 DKKEVAAKFKDLLSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAE-------AI 126
                :...:|:||..:...:.  .|..|:||....|.:        :|.||.|..|       .:
Human   118 ----IHGTYKELLDTVTAPQK--NLKSASRIVFEKKLR--------IKSSFVAPLEKSYGTRPRV 168

  Fly   127 SANNPKITASIVNKWVDTQTSGKIRDLV--MPSDVANLVLVILNAIYFKGQWQKKFNTEQTK-SD 188
            ...||::....:|.||..|..||:....  :|.:::   :::|...:|||||..||::.:|. .|
Human   169 LTGNPRLDLQEINNWVQAQMKGKLARSTKEIPDEIS---ILLLGVAHFKGQWVTKFDSRKTSLED 230

  Fly   189 FHISDQKSVPVQMMS---LVRPFGVSYDRELGANVIELPYRNSNLSMVIFLPDKV-DGLPELEKK 249
            |::.::::|.|.|||   .|..:|:  |.:|...:.:||...| :|::.|||.|| ..|..:|:.
Human   231 FYLDEERTVRVPMMSDPKAVLRYGL--DSDLSCKIAQLPLTGS-MSIIFFLPLKVTQNLTLIEES 292

  Fly   250 MVG-----FTPKLININVHLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGG 309
            :..     ...:|..:...|.:||.|:.:...:.:.|..|.:|..| .|.||:. :......:..
Human   293 LTSEFIHDIDRELKTVQAVLTVPKLKLSYEGEVTKSLQEMKLQSLF-DSPDFSK-ITGKPIKLTQ 355

  Fly   310 VVHKAFLEVNEEGSEAAAATAVVFRYKSIRSPPMDFNVNHPFAYVIRDAEN--IYFQGHFVNP 370
            |.|:|..|.||:|:....:..:...:.:.   |:|:::|.||.:|:||.:.  :.|.|..::|
Human   356 VEHRAGFEWNEDGAGTTPSPGLQPAHLTF---PLDYHLNQPFIFVLRDTDTGALLFIGKILDP 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 102/381 (27%)
SERPINF1NP_001316832.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..39
PEDF 40..415 CDD:239007 105/386 (27%)
O-glycosylated at one site 371..383 0/11 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.