DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn38F and Spn42Da

DIOPT Version :10

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_524955.2 Gene:Spn42Da / 49805 FlyBaseID:FBgn0265137 Length:424 Species:Drosophila melanogaster


Alignment Length:369 Identity:132/369 - (35%)
Similarity:217/369 - (58%) Gaps:18/369 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 FTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKL-PDDKKEVAAKFKDL 80
            |:.::|..|:.:...:|::.||.|::...::|.:||..:||.::...|.| ..|.:::|..|..:
  Fly    48 FSINVYGKLSGQKPGENIVFSPFSIQTCAAMARLGAENETATQLDQGLGLASSDPEQIAHSFHQV 112

  Fly    81 LSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISANNPKITASIVNKWVDTQ 145
            |:..:..:   ||.:||:|:|.:.::|..|::|::...|.:.|:::..:.....|:.:|.||:.:
  Fly   113 LAAYQDSQ---ILRIANKIFVMDGYQLRQEFDQLLSKQFLSAAQSVDFSKNVQAAATINNWVEQR 174

  Fly   146 TSGKIRDLVMPSDVANLV--LVILNAIYFKGQWQKKFNTEQTKSD-FHISDQKSVPVQMMSLVRP 207
            |:..|:||| |:||.|..  ||::|||:|||.||.:|....|:.| ||:..:::|.|.||||...
  Fly   175 TNHLIKDLV-PADVLNSESRLVLVNAIHFKGTWQHQFAKHLTRPDTFHLDGERTVQVPMMSLKER 238

  Fly   208 FGVSYDRELGANVIELPYRNSNLSMVIFLPDKVDGLPELEKK-----MVGFTPKLININVHLRLP 267
            |..:....|.|..:||||::|:|||:|.||:...|||.||:|     :...|..|....|.|:||
  Fly   239 FRYADLPALDAMALELPYKDSDLSMLIVLPNTKTGLPALEEKLRLTTLSQITQSLYETKVALKLP 303

  Fly   268 KFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVAN-SGAHVGGVVHKAFLEVNEEGSEAAAATAV 331
            :||.||...|.:|...:|:...|...|:|..::.: ....|..::||||:||||||:||||||.:
  Fly   304 RFKAEFQVELSEVFQKLGMSRMFSDQAEFGKMLQSPEPLKVSAIIHKAFIEVNEEGTEAAAATGM 368

  Fly   332 VFRYK-SIRSP--PMDFNVNHPFAYVIRDAENI-YFQGHFVNPE 371
            ..|.| :|.||  |::|..:|||.||:...::: .|.|..|..|
  Fly   369 AVRRKRAIMSPEEPIEFFADHPFTYVLVHQKDLPLFWGSVVRLE 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 serpin42Dd-like_insects 12..370 CDD:381070 131/366 (36%)
Spn42DaNP_524955.2 serpin42Da-like 45..407 CDD:381065 129/362 (36%)

Return to query results.
Submit another query.