DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and serpina3

DIOPT Version :10

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001011275.1 Gene:serpina3 / 496728 XenbaseID:XB-GENE-5933441 Length:414 Species:Xenopus tropicalis


Alignment Length:379 Identity:118/379 - (31%)
Similarity:197/379 - (51%) Gaps:29/379 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SVSCRFTDDLYQLLA------KENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKL---- 66
            |.:..|..:||:.|.      ||:..||::.||||:..|.|:..:||:.::.|::...|.|    
 Frog    42 SANIDFALNLYKHLVTKTQAEKESTQKNIVFSPLSILTAFSMLLLGAKSESHQQILSGLSLNQTQ 106

  Fly    67 -PDDKKEVAAKFKDLLSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISANN 130
             |::....|  |:.||..|...:|...:.:.|.::|.:..|::..:.|.::..:.||.......|
 Frog   107 VPEEDMHEA--FEHLLQVLNRPKSDLQVKIGNAVFVEDTLKILDSFVQEIEHHYHAEIFPSHFKN 169

  Fly   131 PKITASIVNKWVDTQTSGKIRDLVMPSDVANLV-LVILNAIYFKGQWQKKFNTEQTKS-DFHISD 193
            |......:|.:|:.:|.|:|::||  .|::... ||::|.|.|..:||..|::..|.| .|.:.:
 Frog   170 PAEAEKQINDFVNNKTEGRIQELV--KDLSEATKLVVINFILFNAEWQNPFSSFFTHSRQFSVDE 232

  Fly   194 QKSVPVQMMSLVRPFGVSYDRELGANVIELPYRNSNLSMVIFLPDKVDGLPELEKKMVGFTPKLI 258
            ..:|.|||||....:....|.::..:|::|||:| |.||:|.:|: :..:.|:|:.:...|.|..
 Frog   233 NTTVEVQMMSKTDLYQFYKDEKIPCSVLQLPYKN-NASMLIIVPE-LGKIHEVEEALSVETLKRW 295

  Fly   259 NINV-----HLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGVVHKAFLEV 318
            ..:.     .|.||||.|..|.:|:.:|..||:...|..:|||:.:..||...:..|||||.|.|
 Frog   296 TSSAEKSFFELFLPKFSISSSLKLKDILTDMGMGIIFTDAADFSGISENSRLKLSKVVHKAVLNV 360

  Fly   319 NEEGSEAAAATAVVFRYKSIRSPPMDFNVNHPFAYVIRDAE--NIYFQGHFVNP 370
            .|.|:|||||:||.....|:.   :.|.|:.||..:|...|  :|.|....::|
 Frog   361 AENGTEAAAASAVEGVLTSLM---VQFVVDKPFITLICSQEPYSILFMSRVIDP 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 serpin42Dd-like_insects 12..370 CDD:381070 117/377 (31%)
serpina3NP_001011275.1 serpinA 43..411 CDD:381073 116/376 (31%)

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