DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and serpinc1

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001008153.1 Gene:serpinc1 / 493515 XenbaseID:XB-GENE-975782 Length:456 Species:Xenopus tropicalis


Alignment Length:382 Identity:118/382 - (30%)
Similarity:197/382 - (51%) Gaps:25/382 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVSCRFTDDLYQLLA--KENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKLPDDKKEV 73
            :..:.:|....|:.||  |:|.: |:..||||:..|.::|.:||...|.:|:.:|.......:..
 Frog    75 SQANAKFAIAFYKNLADSKQNTE-NIFMSPLSISQAFTMAKLGACNNTLKELMEVFYFDTISERA 138

  Fly    74 AAKFKDLLSKLEGR------ESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAIS-ANNP 131
            :.:.....:||..|      :|..::|: ||::..........|..:.:..:.|:...:: ...|
 Frog   139 SDQIHYFFAKLNCRLFRKANKSSELVSV-NRLFGEKSLTFNETYQDISELVYGAKLLPLNFKEKP 202

  Fly   132 KITASIVNKWVDTQTSGKIRDLVMPSDV--ANLVLVILNAIYFKGQWQKKFNTEQTKSD-FHISD 193
            :::..|:|.||..:|..:|.| |:|..|  .:.|||::|||||||.|:.|||:|.||.: |:..:
 Frog   203 ELSREIINNWVSDKTEKRITD-VIPVGVITPDTVLVLINAIYFKGLWKSKFNSENTKMEQFYPDE 266

  Fly   194 QKSVPVQMMSLVRPFGVSYDRELGANVIELPYRNSNLSMVIFLPDKVDGLPELE-----KKMVGF 253
            ........|.....|..|..::.|..|:||||:..:::||:.||.....|.::|     :|:..:
 Frog   267 SNHCLAATMYQEGIFRYSSFKDDGVQVLELPYKGDDITMVLVLPSPETPLMKVEQNLTLEKLGNW 331

  Fly   254 TPKLININVHLRLPKFKIEFSARLEQVLIAMGIQDAF-KTSADFNDLVA--NSGAHVGGVVHKAF 315
            ..|...:.:.:.||:|::|.|..:::.|..||:.|.| ..||....:||  .:..:|....||||
 Frog   332 LQKSRELQLSVYLPRFRVEDSFSVKEKLQQMGLVDLFDPNSAKLPGIVAGGRTDLYVSDAFHKAF 396

  Fly   316 LEVNEEGSEAAAATAVVFRYKSIRSPPMDFNVNHPFAYVIRDA--ENIYFQGHFVNP 370
            ||||||||||||:|||:...:|:....:.|..|.||...||:.  .::.|.|...||
 Frog   397 LEVNEEGSEAAASTAVILTGRSLNLNRITFRANRPFLVFIREVAINSVLFMGRVANP 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 116/377 (31%)
serpinc1NP_001008153.1 serpinC1_AT3 61..455 CDD:381002 118/382 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.110

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