DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn38F and Serpina11

DIOPT Version :10

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001008776.1 Gene:Serpina11 / 362774 RGDID:1359239 Length:462 Species:Rattus norvegicus


Alignment Length:417 Identity:97/417 - (23%)
Similarity:183/417 - (43%) Gaps:65/417 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVSCRFTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVL-----KLPDDK 70
            |.....|...||:.||:| ...|::.||:|:...::|..:||...|..::...|     :.|  .
  Rat    51 TPTITNFALRLYKQLAEE-IPGNILFSPVSLSSTVALLSLGAHADTQAQILQSLGFNLTETP--A 112

  Fly    71 KEVAAKFKDLLSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISANNPKITA 135
            .::...|:.||..|:.......|.|.:.::::.:.|....:....|:.:.|.|.:.:......|.
  Rat   113 ADIHRGFQSLLHTLDLPSPKLELKLGHSLFLDRQLKPQQRFLDSAKELYGALAFSANFTEAAATG 177

  Fly   136 SIVNKWVDTQTSGKIRDLVMPSDVANLVLVILNAIYFKGQWQKKFNTEQTK--SDFHISDQKSVP 198
            ..:|..|..||.|::.. .:|....:.::|:||.|:||.:|:..|:..||:  ..|.:..:..:.
  Rat   178 QQINDLVRKQTYGQVVG-CLPEFDRDTLMVLLNYIFFKAKWKHPFDRYQTRKQESFFVDQRLQLR 241

  Fly   199 VQMMSLVRPFGVSYDRELGANVIELPYRNSNLSMVI-------------------------FLP- 237
            :.||.........||:|....|:::.|..:.|.:::                         ||| 
  Rat   242 IPMMRQKEMHRFLYDQEASCTVLQIEYSGTALLLLVLPDPGKMQQVEAALQPETLRRWGQRFLPR 306

  Fly   238 --------------DKVDGLPE-----LEKKMVGFTPKLININVHLRLPKFKIEFSARLEQVLIA 283
                          |:|:..|:     |..|.:..|.....:::|  ||:|.:..:..||::|..
  Rat   307 KAQAGGAGNGGLHWDRVNEFPQNRVGKLSLKHLQMTQTWSLLDLH--LPRFSVSATYNLEEILPL 369

  Fly   284 MGIQDAFKTSADFNDLVANSGAHVGGVVHKAFLEVNEEGSEAAAATAVVFRYKSIR---SPPMDF 345
            :|:...|...||.:.::......|..|.|||.:::||:|:|||||:.::.:..|:.   :|...|
  Rat   370 VGLSSLFDVEADLSGIMGQLNKTVSRVSHKAVVDMNEKGTEAAAASGLLSQPPSLNMTSAPHAHF 434

  Fly   346 NVNHPFAYVIRD--AENIYFQGHFVNP 370
              |.||..::.:  .:::.|.|..|||
  Rat   435 --NRPFLLLLWEVTTQSLLFLGKVVNP 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 serpin42Dd-like_insects 12..370 CDD:381070 94/414 (23%)
Serpina11NP_001008776.1 serpinA11 50..462 CDD:381025 97/417 (23%)

Return to query results.
Submit another query.