DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and Spn42Db

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster


Alignment Length:366 Identity:114/366 - (31%)
Similarity:200/366 - (54%) Gaps:18/366 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LYQLLAKENADKNLITSPLSVEIALSLAYMGAR--GKTAQEMRDVLKLPD-DKKEVAAKFKDLLS 82
            |:..|.:.:|..|:|.||||:.|:.::..||..  ..||:||.:.|:... :.::||..|..:  
  Fly    17 LHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDEGLRFGGLEAQQVAESFGVV-- 79

  Fly    83 KLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISANNPKITASIVNKWVDTQTS 147
             |:..|...:|.:||.:||....::..::..:::..|:::...|...:.: .|||:||||::||:
  Fly    80 -LKSYEQCQVLKMANGLYVMKGLQVDEQFGHILEQKFRSKPMEIDFGSEQ-AASIINKWVESQTN 142

  Fly   148 GKIRDLVMPSDVA-NLVLVILNAIYFKGQWQKKFNTEQTKSDFHISDQKSVPVQMMSLVRPFGVS 211
            ..|:|::.|..:. :..|.::|.|:|||:|...||.::|:.:......:...|:||.:...|..:
  Fly   143 NLIKDIIGPRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFFGSDRPTRVRMMHVCENFFFA 207

  Fly   212 YDRELGANVIELPYRNSNLSMVIFLPDKVDGLPELEKKMVGFTPKLINI-----NVHLRLPKFKI 271
            ......|..:.:.|...||:|:|.|||:...|..||||:...:.::::.     .|.:::|.|..
  Fly   208 VLPMFEATALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDISLEVVSSAMNLEKVDVKIPSFTA 272

  Fly   272 EFSARLEQVLIAMGIQDAFKTSADFNDLV-ANSGAHVGGVVHKAFLEVNEEGSEAAAATAVVFRY 335
            ||...|.|||:.||:...|...|:...:: :.....|..:|||||:|:||.|:|||||||.|..:
  Fly   273 EFQQELSQVLMLMGMNRIFSGQAELGGMLQSEESLFVSQIVHKAFIEINEVGTEAAAATAAVATF 337

  Fly   336 KSI---RSPPMDFNVNHPFAYVIRD-AENIYFQGHFVNPEL 372
            :|:   :.||..|:.|.||.|.|:| ...:.|.|||:..::
  Fly   338 RSMPARQGPPKVFHANRPFFYAIKDNTHGLLFAGHFITTKV 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 114/362 (31%)
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 112/359 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446366
Domainoid 1 1.000 172 1.000 Domainoid score I1138
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 172 1.000 Inparanoid score I1521
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140751at6656
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm1112
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
99.000

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