DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn38F and serpinb1l4

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_956235.2 Gene:serpinb1l4 / 335229 ZFINID:ZDB-GENE-030131-7169 Length:433 Species:Danio rerio


Alignment Length:440 Identity:143/440 - (32%)
Similarity:221/440 - (50%) Gaps:91/440 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVSCRFTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVL----------- 64
            ::.:.:|:.:|::.::..||..|:..||:|:..||::..:||:|.||.:|..||           
Zfish     5 SAANTQFSLNLFKKISGGNASGNVFYSPVSISSALAMVSLGAKGNTADQMFKVLGFNNPPKPGGA 69

  Fly    65 --------------------------------KLPDDKK--------------EVAAKFKDLLSK 83
                                            :||.|.|              ::.:.|..|:|:
Zfish    70 TPTPAQATQKPKWTCGVKSQHEPQALQQPQKFELPADLKKCPAQPVPGQKAEEQIHSSFNKLMSE 134

  Fly    84 LEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISANNPKITASIV--NKWVDTQT 146
            |....:..:||||||:|....::.:.:|....|..:.|..|.:...| |..||.|  ||||:..|
Zfish   135 LNKPGAPYVLSLANRLYGEQTYQFLEKYLSDAKKYYAAGLEKVDFKN-KSEASCVNINKWVEKNT 198

  Fly   147 SGKIRDLVMPSDVANLV--LVILNAIYFKGQWQKKFNTEQTK-SDFHISDQKSVPVQMMSLVRPF 208
            ..||:|| :||...:.:  ||::|||||||.|:|||..|.|| ..|.::..::.||:||.....|
Zfish   199 QEKIKDL-LPSGAIDAMTRLVLVNAIYFKGNWEKKFPKEATKDGQFKLNKNQTKPVKMMHQKAQF 262

  Fly   209 GVSYDRELGANVIELPYRNSNLSMVIFLPDKVD----GLPELEK-----KMVGFTPKLININVHL 264
            ......|:.:.::||||...||||:|.|||:::    ||.:||:     |::.:|..:....|.:
Zfish   263 PFVVIPEINSQILELPYVGKNLSMLIILPDEIEDATTGLQKLERALTYEKLMQWTKVMRQQEVQV 327

  Fly   265 RLPKFKIEFSARLEQVLIAMGIQDAFKTS-------ADFNDLVANSGAHVGGVVHKAFLEVNEEG 322
            .|||||.|.:..::.:|::||::|.|...       :..||||.:.      |:||||:||||||
Zfish   328 SLPKFKTEQTYDMKSLLVSMGMEDVFDPQKVNLTGMSSSNDLVLSK------VIHKAFVEVNEEG 386

  Fly   323 SEAAAATAVVFRYKSIRSPPMDFNVNHPFAYVIR--DAENIYFQGHFVNP 370
            :||||||..|.   |||:....||.:|||.:.||  ....|.|.|.|.:|
Zfish   387 TEAAAATGAVV---SIRTLAQIFNADHPFLFFIRHNSTNTILFYGRFCSP 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 142/435 (33%)
serpinb1l4NP_956235.2 SERPIN 4..433 CDD:294093 142/438 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 229 1.000 Inparanoid score I3432
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - mtm8430
orthoMCL 1 0.900 - - OOG6_100128
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.880

Return to query results.
Submit another query.