DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and serpina1

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_017207927.1 Gene:serpina1 / 322701 ZFINID:ZDB-GENE-030131-1421 Length:433 Species:Danio rerio


Alignment Length:382 Identity:117/382 - (30%)
Similarity:200/382 - (52%) Gaps:29/382 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CLLLLATSVSCRFTDDLYQLLAKENAD---KNLITSPLSVEIALSLAYMGARGKTAQEMRDVL-- 64
            |.||...:....|:  ||:.|| .|.|   ||:..||:.:.:||||..:||:..|..::...|  
Zfish    63 CHLLAPHNADFAFS--LYKKLA-SNPDGQGKNIFFSPVGISMALSLLAVGAKASTLSQIYSGLGY 124

  Fly    65 --KLPDDKKEVAAKFKDLLSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAIS 127
              ..|:   :|...::.||..|...:....|.....:.:.:.||:|.::.:..:..:.:||..:.
Zfish   125 SALTPE---QVNEGYEHLLHMLGHSQDAMQLEAGAGVAIRDGFKVVDQFLKDAQHYYNSEAFGVD 186

  Fly   128 ANNPKITASIVNKWVDTQTSGKIRDLVMPSDVANLVLVILNAIYFKGQWQKKFNTEQT-KSDFHI 191
            .:.|:|.|:.:||::..:|..||.::|...| |:.|::::|.:||:|:|:|.|:.:.| |:||.:
Zfish   187 FSKPEIAAAEINKFIARKTHDKITNMVKDLD-ADTVMMLINYMYFRGKWEKPFDAKLTHKADFKV 250

  Fly   192 SDQKSVPVQMMSLVRPFGVSYDRELGANVIELPYRNSNLSMVIFLPDKVDG-LPELEKK-----M 250
            ....:|.|.||.....:.:..|......|:.:||: .|.||:|.|||  || :.|||:.     :
Zfish   251 DQDTTVQVDMMKRTGRYDIYQDPVNQTTVMMVPYK-GNTSMMIVLPD--DGKMKELEESICRHHL 312

  Fly   251 VGFTPKLININVHLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGVVHKAF 315
            ..:..||...:|.|.:|||.|..:::|:.:|..||:.|||...|||:.:.......|..|:|:|.
Zfish   313 KNWHDKLFRSSVDLFMPKFSISATSKLDGILKDMGMTDAFNDKADFSGMTEEVKVKVSQVLHQAV 377

  Fly   316 LEVNEEGSEAAAATAVVFRYKSIRSPPMDFNVNHPF-AYVIRDAE-NIYFQGHFVNP 370
            :.|:|:|:||||.|.:.....|:   |....:|.|| ..::.|:. :|.|.|...||
Zfish   378 MSVDEKGTEAAAITTIEIMPMSL---PDTVILNRPFLVLIVEDSTMSILFMGKITNP 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 112/371 (30%)
serpina1XP_017207927.1 alpha-1-antitrypsin_like 69..428 CDD:239011 112/371 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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