DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn38F and Spn75F

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001036614.1 Gene:Spn75F / 317912 FlyBaseID:FBgn0052203 Length:356 Species:Drosophila melanogaster


Alignment Length:385 Identity:92/385 - (23%)
Similarity:171/385 - (44%) Gaps:63/385 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LCLL--LLATSVSCRFTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKL 66
            :|.|  ||..|.:..|..:|.:.|:|....:|.:.||:::..||.|.|:.....|.|::...|:|
  Fly     7 ICFLIFLLKHSYAYNFEINLTKQLSKGRLARNFVYSPIAIRQALGLLYLSKDNVTDQQLESALQL 71

  Fly    67 PD-DKKEVAAKFKDLLSKLEGRESVA--ILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISA 128
            .. :::|:.:.||      |.||.||  ..::.||||::..:...|...|: .::...|.:.::.
  Fly    72 TGLNQEEIISLFK------EAREKVAQEQFTMGNRIYLSPDYNASPNITQL-SENLGVEVKNMTF 129

  Fly   129 NNPKITASIVNKWVDTQTSGKIRDLVMPSDVANLV-LVILNAIYFKGQWQKKFNTEQTKSDFHIS 192
            :..:..||.:.||::........:|...:|::... :|.:..:.:...|:.: .|..|...|.:.
  Fly   130 SGDQSAASEIKKWLNKWIGKAGGNLFGKNDISQTTQIVAVQGMSYSCVWKNR-ETALTNRTFTLL 193

  Fly   193 DQKSVP----VQMMSLVRPFG-VSYDRELGANVIELPYRNSNLSMVIFLPDKVDGLPELEKKMVG 252
            .|...|    .|||....|.. .:.|:..|   :.:|::||::.|::.||     .|....:.:.
  Fly   194 RQNKKPFVYTTQMMYTEAPMDFFNNDQVRG---VMVPFKNSDMGMLVLLP-----RPRYSTQQIL 250

  Fly   253 FT-PKLININV------HLRLPKFKIEFSARLEQVLIAMGIQDAF-KTSA----DFNDLVANSGA 305
            :: ..::.|.:      ||.|||||:..|..|...|.|:|||:.| .|:|    .:|...|:...
  Fly   251 YSLDTILKIKLRRSKKTHLFLPKFKVSESVDLNMALKALGIQNLFTNTNAANFKQYNSFDADQNR 315

  Fly   306 HVGGVVHKAFLEVNEEGSEAAAATAVVFRYKSIRSPPMDFNVNHPFAYVIRDAENIYFQG 365
            .:      ..::|.::..:     .||:             ||..|.:|::|...||..|
  Fly   316 VL------MTIDVGDDFDD-----RVVY-------------VNRGFVFVVKDKSTIYMIG 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 87/373 (23%)
Spn75FNP_001036614.1 SERPIN 21..353 CDD:294093 87/371 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446370
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.