DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and Serpinb1b

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_038952280.1 Gene:Serpinb1b / 306891 RGDID:1560658 Length:380 Species:Rattus norvegicus


Alignment Length:385 Identity:131/385 - (34%)
Similarity:209/385 - (54%) Gaps:34/385 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVSCRFTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKLP-----DDK 70
            :|.:..|..:|:..|::.:...| |.||.|:..||::.::||:|.:|...   |:|.     |..
  Rat     5 SSANSLFALELFHTLSESSPTGN-IFSPFSISSALAMVFLGAKGSSAPSS---LRLAETFHFDSV 65

  Fly    71 KEVAAKFKDLLSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISANNPKITA 135
            :::.::|:.|.:::....:...|.:|||:|....:..:||:....:..:.|:...:...:....|
  Rat    66 EDIHSRFQSLNAEMRKHGASHTLKVANRLYGEKTYNFLPEFLASTQKMYGADLAPVDFQHASEDA 130

  Fly   136 -SIVNKWVDTQTSGKIRDLVMPSDVANLV--LVILNAIYFKGQWQKKFNTEQ-TKSDFHISDQKS 196
             ..:||||..||.|||.:| :...|.|..  ||::|||||||.||:||.|.. |.:.|.::.:.:
  Rat   131 RKEINKWVKGQTEGKIPEL-LAGGVVNSTTKLVLVNAIYFKGIWQEKFLTRHTTDAPFRLNKKDT 194

  Fly   197 VPVQMMSLVRPFGVSYDRELGANVIELPYRNSNLSMVIFLPDKVD----GLPELE-----KKMVG 252
            ..|:||.....|...|..:|...|:|:||:...|||||.||:.::    ||.::|     :|:..
  Rat   195 KMVKMMYQKEKFPFGYIPDLKCKVLEMPYQGGELSMVILLPEDIEDESTGLQKIEEQLTLEKLYE 259

  Fly   253 FT--PKLININVHLRLPKFKIEFSARLEQVLIAMGIQDAFKTS-ADFNDLVANSGAHVGGVVHKA 314
            :|  ..|..|:||:.|||||||.|..|...|..:|:||.|.:| ||.:.:..:....:..:|||:
  Rat   260 WTKHENLKEIDVHVNLPKFKIEESYILNSNLGRLGLQDLFSSSKADLSGMSESRDIFISKIVHKS 324

  Fly   315 FLEVNEEGSEAAAATAVVFRY--KSIRSPPMDFNVNHPFAYVIR--DAENIYFQGHFVNP 370
            |:||||||:|||||||.:..|  .||.:    |.|:|||.:.||  ...|:.|.|...:|
  Rat   325 FVEVNEEGTEAAAATAGLVEYCLVSIEA----FIVDHPFLFFIRHNPTANMLFFGRVCSP 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 129/380 (34%)
Serpinb1bXP_038952280.1 serpinB1_LEI 1..380 CDD:381028 130/383 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - otm46144
orthoMCL 1 0.900 - - OOG6_100128
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.930

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