DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and Serpinb13

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001100638.1 Gene:Serpinb13 / 304690 RGDID:1304661 Length:389 Species:Rattus norvegicus


Alignment Length:387 Identity:123/387 - (31%)
Similarity:211/387 - (54%) Gaps:29/387 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TSVSCRFTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVL---------KL 66
            ::.:..|..||::.|.| .:|.|:..|||.:..|:.:..:|.:|.||.|::.||         :|
  Rat     5 STATTHFLFDLFKELNK-TSDGNVFFSPLGISTAIGMILLGTQGATASELQKVLYSEQGTGSSRL 68

  Fly    67 PDDKKEVAA------KFKDLLSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEA 125
            ..::||:..      :|:.||:::........|.::||:|....:..:.:|...|:..:.|..|.
  Rat    69 KSEEKEIEKTEEIHHQFQKLLTEISKPTKDYDLIISNRLYGERTYLFLQKYIDYVEKYYHASLEP 133

  Fly   126 IS-ANNPKITASIVNKWVDTQTSGKIRDLVMPSDV-ANLVLVILNAIYFKGQWQKKFNTEQTK-S 187
            :. .|....:...:|.||::||:.|::||.....: ::..||::|.:||||.|.::|..|.|| .
  Rat   134 VDFVNAADESRKKINSWVESQTNEKVKDLFPEGSLNSSTKLVLINTVYFKGLWDREFKKEHTKEE 198

  Fly   188 DFHISDQKSVPVQMMSLVRPFGVSYDRELGANVIELPYRNSNLSMVIFLPDKVDGLPEL-----E 247
            ||.::...|.|||||:....|..:...:|.|.::.:||:||:.||.:.||:.:|||.::     .
  Rat   199 DFWLNKNISKPVQMMAQCSSFSFTLLEDLQAKIVGIPYKNSDFSMFVLLPNDIDGLEKIIDKLSP 263

  Fly   248 KKMVGFTP--KLININVHLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGV 310
            :|:|.:|.  :|....|.||||:.|:|.:..|:..|.|:||..||...||::.:.|:||......
  Rat   264 EKLVEWTSPGQLKQRKVDLRLPRLKVEETYDLQPTLEAVGIHSAFSEHADYSGMSAHSGLQTQNF 328

  Fly   311 VHKAFLEVNEEGSEAAAATAVVFRYKSIRSPPMDFNVNHPFAYVI--RDAENIYFQGHFVNP 370
            :|::||.|.|||.||.|.|.|.|:..|..|..: .:.||||.:.:  |::::|.|.|.|.:|
  Rat   329 LHRSFLVVTEEGVEATAGTGVGFKVLSAASCEL-VHCNHPFLFFVRHRESDSILFFGRFSSP 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 122/382 (32%)
Serpinb13NP_001100638.1 SERPIN 4..389 CDD:294093 122/385 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57242
OrthoDB 1 1.010 - - D556621at33208
OrthoFinder 1 1.000 - - FOG0000050
OrthoInspector 1 1.000 - - otm46144
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.930

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