DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and Serpinb3

DIOPT Version :10

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001382662.1 Gene:Serpinb3 / 304688 RGDID:1549766 Length:387 Species:Rattus norvegicus


Alignment Length:390 Identity:130/390 - (33%)
Similarity:216/390 - (55%) Gaps:33/390 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LATSVSCRFTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKLPD----- 68
            |....:.:||.:||:.|  .:::.|:..||||:..||::..:||:|.|.:::...|:|.:     
  Rat     3 LFAKATTQFTLELYRQL--RDSEDNIFYSPLSIMTALAMLQLGAKGNTEKQIEKALQLSETTKKP 65

  Fly    69 --------DKKEVAAKFKDLLSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEA 125
                    |::.|..:|:.::::|........|...|.||....|..:..:.:.:|..::|..|:
  Rat    66 KEKSADSHDEENVHEQFRKIMNQLNKSNGAYDLKSPNSIYGAKGFPFLQTFMEDIKKYYQANVES 130

  Fly   126 IS-ANNPKITASIVNKWVDTQTSGKIRDLVMPSDV-ANLVLVILNAIYFKGQWQKKFNTEQTKSD 188
            :. |:..:.:...:|.||:.:|:|||:||.....: ::.:||::||:||||||..||:.::|:.|
  Rat   131 LDFAHAAEESQKKINSWVENKTNGKIKDLFPRGSLNSSTILVLVNAVYFKGQWNHKFDEQRTRED 195

  Fly   189 -FHISDQKSVPVQMMSLVRPFGVSYDRELGANVIELPYRNSNLSMVIFLPDKVDGLPELEKKMVG 252
             |.::...|.|||||.....|...:..::.|.::|:||:...|||.|.||.::|||.:||:|:..
  Rat   196 KFWLNKNTSKPVQMMRQTNEFNFIFLEDVQAKMVEIPYKGKELSMFILLPMEIDGLKKLEEKLSA 260

  Fly   253 FT------PKLINI-NVHLRLPKFKIEFSARLEQVLIAMGIQDAFK-TSADFNDLVANSGAHVGG 309
            .|      ||.:.: .::|.||:||::....|...|..||:.|||. ..|||:.:.:..|..|..
  Rat   261 DTLLAWTSPKNMRMTQLNLSLPRFKVQEKYDLPGPLEHMGMVDAFNPQKADFSGMSSTKGLVVSK 325

  Fly   310 VVHKAFLEVNEEGSEAAAATAVVFRYKSIRSPP--MDFNVNHPFAYVIR--DAENIYFQGHFVNP 370
            |:||:||||||||:||||||.|..|   |.|.|  .:|..|.||...|:  :..:|.|.|...:|
  Rat   326 VLHKSFLEVNEEGAEAAAATGVETR---ILSAPRTTEFTCNRPFIVFIKPNNTNSILFFGRVSSP 387

  Fly   371  370
              Rat   388  387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 serpin42Dd-like_insects 12..370 CDD:381070 128/385 (33%)
Serpinb3NP_001382662.1 serpin 1..387 CDD:476815 129/388 (33%)

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