DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and Serpina3m

DIOPT Version :10

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001257911.1 Gene:Serpina3m / 299276 RGDID:735068 Length:419 Species:Rattus norvegicus


Alignment Length:382 Identity:125/382 - (32%)
Similarity:204/382 - (53%) Gaps:29/382 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLATSVSCRFTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKL---PDD 69
            |...|::..|...||::||.:|.|||::.||||:..||::..:||:|.|.:|:.:||:.   ...
  Rat    45 LTLESINTDFAFSLYKMLALKNPDKNVVFSPLSISAALAIVSLGAKGNTLEEILEVLRFNLTESY 109

  Fly    70 KKEVAAKFKDLLSKL-EGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISANNPKI 133
            :.::...|..||.:| :..:.|.|:: .|.::::...:::.|:.:..:..::.||.......|::
  Rat   110 ETDIHQGFGHLLQRLSQPGDQVKIIT-GNALFIDKNLQVLAEFQEKTRALYQVEAFTADFQQPRV 173

  Fly   134 TASIVNKWVDTQTSGKIRDLVMP-SDVANLVLVILNAIYFKGQWQKKFNTEQT-KSDFHISDQKS 196
            |..::|.:|..||.|||::||.. .:..::|||  |.:.|:|:|:..|:.:.| :|:|::.:::|
  Rat   174 TEKLINDYVRNQTQGKIQELVSGLKERTSMVLV--NYLLFRGKWKVPFDPDYTFESEFYVDEKRS 236

  Fly   197 VPVQMM---SLVRPFGVSYDRELGANVIELPYRNSNLSMVIFLPDK-----VDG--LPE-LEKKM 250
            |.|.||   .|..|:  ..|.||..:|:||.| ..|.|.:..||||     |:.  .|| |:|..
  Rat   237 VKVSMMKIEELTTPY--FRDEELSCSVLELKY-TGNSSALFILPDKGRMQQVEASLQPETLKKWK 298

  Fly   251 VGFTPKLININVHLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGVVHKAF 315
            ....|:.|:   .|.||:..|.....||:||..:||:|.|...||.:.:.......|..||||..
  Rat   299 DSLRPRKID---ELYLPRLSISTDYSLEEVLPELGIRDVFSQQADLSRITGAKDLSVSQVVHKVV 360

  Fly   316 LEVNEEGSEAAAATAVVFRYKSIRSPPMDFNVNHPFAYVI--RDAENIYFQGHFVNP 370
            |:|||.|:||||||......:|.| |||....|.||...:  ...:.|.|....:||
  Rat   361 LDVNETGTEAAAATGANLVPRSGR-PPMIVWFNRPFLIAVSHTHGQTILFMAKVINP 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 serpin42Dd-like_insects 12..370 CDD:381070 122/376 (32%)
Serpina3mNP_001257911.1 serpinA3_A1AC 37..416 CDD:381019 123/380 (32%)

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