DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and Serpina3b

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_766612.1 Gene:Serpina3b / 271047 MGIID:2182835 Length:420 Species:Mus musculus


Alignment Length:386 Identity:110/386 - (28%)
Similarity:185/386 - (47%) Gaps:25/386 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KYLCLLLLATSVSCRFTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKL 66
            |.|..|.|| |::..|....|:.||.:|..||:..||..:..||:...:||:|.|.:|:.:|||.
Mouse    40 KQLDSLTLA-SINTDFAFSFYKELALKNPHKNIAFSPFGIATALNSLTLGAKGNTLEEILEVLKF 103

  Fly    67 ---PDDKKEVAAKFKDLLSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISA 128
               ...:.::...||.||.:|........:...|.::|....:::.|:.:..:..:..|....:.
Mouse   104 NLTETSEADIHQGFKHLLQRLSHPGDQVQIRTGNALFVEKHLQILAEFKEKARALYHTEVFTANF 168

  Fly   129 NNPKITASIVNKWVDTQTSGKIRDLVMPSDVANLVLVILNAIYFKGQWQKKFNTEQT-KSDFHIS 192
            ..|.....::|.::..||.|||::||...| .|..:||:|.::||.:|...||::.| ...|.:.
Mouse   169 QQPHEAMKLINSYMSNQTQGKIKELVSDMD-GNTSMVIVNDLFFKAEWMVPFNSDDTFMGKFIVD 232

  Fly   193 DQKSVPVQMM---SLVRPFGVSYDRELGANVIELPYRNSNLSMVIFLPD-----KVDGLPE---L 246
            ..:.|.|.||   :|..|:  ..|.||...|:||.|:.:..:|.| |||     :|:...:   |
Mouse   233 RSRHVKVPMMKTKNLRTPY--FRDEELKCTVVELNYKGNGKAMFI-LPDQGKMQQVEASLQPGTL 294

  Fly   247 EKKMVGFTPKLININVHLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGVV 311
            :|......|:.|.   .|.||||.:.....||.:|..:||::.|.|.||.:.:.......|..::
Mouse   295 KKWRKSLRPRKIK---ELHLPKFSLSQHYNLEDILPELGIRELFSTQADLSGITGVKNITVSEMI 356

  Fly   312 HKAFLEVNEEGSEAAAATAVVFRYKSIRSPPMDFNVNHPFAYVIRDAEN--IYFQGHFVNP 370
            |...|::.|:|:|..|.|.|.:.:.|.:..|:.......|.|::.|..:  |:..|..:||
Mouse   357 HSTELDMTEKGTEGDAITIVGYNFMSAKLKPVFVKFEDQFLYIVLDQGDLWIHVMGKVINP 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 102/372 (27%)
Serpina3bNP_766612.1 SERPIN 51..414 CDD:294093 102/369 (28%)
RCL 367..392 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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