DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and Serpina3n

DIOPT Version :10

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_113719.3 Gene:Serpina3n / 24795 RGDID:3747 Length:418 Species:Rattus norvegicus


Alignment Length:386 Identity:127/386 - (32%)
Similarity:196/386 - (50%) Gaps:34/386 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLATSVSCRFTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKL---PDD 69
            |...|::..|...||:.||..|.|||::.||||:..||::..:||:|.:.:|:.:.||.   ...
  Rat    45 LTLASINTDFAFSLYKKLALRNPDKNVVFSPLSISAALAVVSLGAKGNSMEEILEGLKFNLTETP 109

  Fly    70 KKEVAAKFKDLLSKL-EGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISANNPKI 133
            :.|:...|..||.:| :.|:.:.| |..|.:::..:.:::.|:.:..|..::|||........:.
  Rat   110 ETEIHRGFGHLLQRLSQPRDEIQI-STGNALFIEKRLQVLAEFQEKAKALYQAEAFTADFQQSRE 173

  Fly   134 TASIVNKWVDTQTSGKIRDLVMPSDVANLV----LVILNAIYFKGQWQKKFNTEQT-KSDFHISD 193
            ...::|.:|..||.|||:.|     :.||.    :|::|.|||||:|:..|:...| :|:|:...
  Rat   174 AKKLINDYVSKQTQGKIQGL-----ITNLAKKTSMVLVNYIYFKGKWKVPFDPRDTFQSEFYSGK 233

  Fly   194 QKSVPVQMM---SLVRPFGVSYDRELGANVIELPYRNSNLSMVIFLPD-----KVDG--LPE-LE 247
            ::.|.|.||   .|..|:  ..|.||...|:||.| ..|.|.:..|||     :|:.  .|| |.
  Rat   234 RRPVKVPMMKLEDLTTPY--VRDEELNCTVVELKY-TGNASALFILPDQGKMQQVEASLQPETLR 295

  Fly   248 KKMVGFTPKLININVHLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGVVH 312
            :......|.:|:   .|.||||.|.....||.||..:||::.|.|.||.:.:..:....|..|||
  Rat   296 RWKDSLRPSMID---ELYLPKFSISADYNLEDVLPELGIKEVFSTQADLSGITGDKDLMVSQVVH 357

  Fly   313 KAFLEVNEEGSEAAAATAVVFRYKSIRSPPMDFNVNHPFAYVIRDAENIY--FQGHFVNPE 371
            ||.|:|.|.|:||||||.|.|...|.:..|:....:.||..:|.|.|...  |.....||:
  Rat   358 KAVLDVAETGTEAAAATGVKFVPMSAKLDPLIIAFDRPFLMIISDTETAIAPFLAKIFNPK 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 serpin42Dd-like_insects 12..370 CDD:381070 124/379 (33%)
Serpina3nNP_113719.3 serpinA3_A1AC 37..418 CDD:381019 126/384 (33%)
RCL 367..394 11/26 (42%)

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