DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and Serpina3n

DIOPT Version :9

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_113719.3 Gene:Serpina3n / 24795 RGDID:3747 Length:418 Species:Rattus norvegicus


Alignment Length:386 Identity:127/386 - (32%)
Similarity:196/386 - (50%) Gaps:34/386 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLATSVSCRFTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKL---PDD 69
            |...|::..|...||:.||..|.|||::.||||:..||::..:||:|.:.:|:.:.||.   ...
  Rat    45 LTLASINTDFAFSLYKKLALRNPDKNVVFSPLSISAALAVVSLGAKGNSMEEILEGLKFNLTETP 109

  Fly    70 KKEVAAKFKDLLSKL-EGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISANNPKI 133
            :.|:...|..||.:| :.|:.:.| |..|.:::..:.:::.|:.:..|..::|||........:.
  Rat   110 ETEIHRGFGHLLQRLSQPRDEIQI-STGNALFIEKRLQVLAEFQEKAKALYQAEAFTADFQQSRE 173

  Fly   134 TASIVNKWVDTQTSGKIRDLVMPSDVANLV----LVILNAIYFKGQWQKKFNTEQT-KSDFHISD 193
            ...::|.:|..||.|||:.|     :.||.    :|::|.|||||:|:..|:...| :|:|:...
  Rat   174 AKKLINDYVSKQTQGKIQGL-----ITNLAKKTSMVLVNYIYFKGKWKVPFDPRDTFQSEFYSGK 233

  Fly   194 QKSVPVQMM---SLVRPFGVSYDRELGANVIELPYRNSNLSMVIFLPD-----KVDG--LPE-LE 247
            ::.|.|.||   .|..|:  ..|.||...|:||.| ..|.|.:..|||     :|:.  .|| |.
  Rat   234 RRPVKVPMMKLEDLTTPY--VRDEELNCTVVELKY-TGNASALFILPDQGKMQQVEASLQPETLR 295

  Fly   248 KKMVGFTPKLININVHLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGVVH 312
            :......|.:|:   .|.||||.|.....||.||..:||::.|.|.||.:.:..:....|..|||
  Rat   296 RWKDSLRPSMID---ELYLPKFSISADYNLEDVLPELGIKEVFSTQADLSGITGDKDLMVSQVVH 357

  Fly   313 KAFLEVNEEGSEAAAATAVVFRYKSIRSPPMDFNVNHPFAYVIRDAENIY--FQGHFVNPE 371
            ||.|:|.|.|:||||||.|.|...|.:..|:....:.||..:|.|.|...  |.....||:
  Rat   358 KAVLDVAETGTEAAAATGVKFVPMSAKLDPLIIAFDRPFLMIISDTETAIAPFLAKIFNPK 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 Serpin 14..370 CDD:278507 123/377 (33%)
Serpina3nNP_113719.3 serpinA3_A1AC 37..418 CDD:381019 126/384 (33%)
RCL 367..394 11/26 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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