DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn38F and Serpina3c

DIOPT Version :10

Sequence 1:NP_524956.2 Gene:Spn38F / 49806 FlyBaseID:FBgn0028986 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_036789.2 Gene:Serpina3c / 24794 RGDID:2972 Length:416 Species:Rattus norvegicus


Alignment Length:380 Identity:127/380 - (33%)
Similarity:199/380 - (52%) Gaps:24/380 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLATSVSCRFTDDLYQLLAKENADKNLITSPLSVEIALSLAYMGARGKTAQEMRDVLKL---PDD 69
            |...|::..||..||:.||..|.|||::.||||:..||::..:||:..|.:|:.:.||.   ...
  Rat    43 LTLASINTDFTLSLYKKLALRNPDKNVVFSPLSISAALAILSLGAKDSTMEEILEGLKFNLTEIT 107

  Fly    70 KKEVAAKFKDLLSKLEGRESVAILSLANRIYVNNKFKLVPEYNQMVKDSFKAEAEAISANNPKIT 134
            ::|:...|..||.:|...|..|.::..:.::::.:..::.|:.:..:..::|||...........
  Rat   108 EEEIHQGFGHLLQRLSQPEDQAEINTGSALFIDKEQPILSEFQEKTRALYQAEAFVADFKQCNEA 172

  Fly   135 ASIVNKWVDTQTSGKIRDLVMPSDVANLVLVILNAIYFKGQWQKKFNTEQT-KSDFHISDQKSVP 198
            ...:|.:|..||.|||.:|....| ....:|::|.:.|||:|:..||...| :|:|::.:::||.
  Rat   173 KKFINDYVSNQTQGKIAELFSDLD-ERTSMVLVNYLLFKGKWKVPFNPNDTFESEFYLDEKRSVK 236

  Fly   199 VQMM---SLVRPFGVSYDRELGANVIELPYRNSNLSMVIFLPD-----KVDG--LPE-LEKKMVG 252
            |.||   .|..|:  ..|.||..:|:||.| ..|.|.:..|||     :|:.  .|| |:|....
  Rat   237 VPMMKIKDLTTPY--VRDEELSCSVLELKY-TGNASALFILPDQGKMQQVESSLQPETLKKWKDS 298

  Fly   253 FTPKLININVHLRLPKFKIEFSARLEQVLIAMGIQDAFKTSADFNDLVANSGAHVGGVVHKAFLE 317
            ..|::|:   .||:|||.|.....||:||..:||:..|...||.:.:......||..|||||.|:
  Rat   299 LRPRIIS---ELRMPKFSISTDYNLEEVLPELGIRKIFSQQADLSRITGTKNLHVSQVVHKAVLD 360

  Fly   318 VNEEGSEAAAATAVVFRYKSIRSPPMDFNVNHPFAYVIRD--AENIYFQGHFVNP 370
            |:|.|:|.||||||....||:.......|.|.||..||.|  .::::|.|...||
  Rat   361 VDETGTEGAAATAVTAALKSLPQTVPLLNFNRPFMLVITDNNGQSVFFMGKVTNP 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn38FNP_524956.2 serpin42Dd-like_insects 12..370 CDD:381070 124/374 (33%)
Serpina3cNP_036789.2 serpinA3_A1AC 36..416 CDD:381019 127/380 (33%)
RCL 365..392 11/26 (42%)

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